scPDB - Distribution of Binding site Similarity values of 1rfv entry / Site 2

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
1rfv	ADP	Pyridoxal kinase	2.7.1.35

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
1rfv	ADP	Pyridoxal kinase	2.7.1.35	1.000
3keu	ATP	Pyridoxal kinase	2.7.1.35	0.575
2yxu	ATP	Pyridoxal kinase	2.7.1.35	0.563
3fhy	ATP	Pyridoxal kinase	2.7.1.35	0.543
1rfu	ADP	Pyridoxal kinase	2.7.1.35	0.532
4en4	ATP	Pyridoxal kinase	2.7.1.35	0.512
3hyo	ADP	Pyridoxal kinase	/	0.497
3ibq	ATP	Pyridoxal kinase	/	0.483