Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1qsrACOHAT A1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
1qsrACOHAT A1/1.000
5h86BCOHistone acetyltransferase KAT2A2.3.1.480.556
1z4rACOHistone acetyltransferase KAT2A2.3.1.480.535
5h841VUHistone acetyltransferase KAT2A2.3.1.480.520
1cm0COAHistone acetyltransferase KAT2B2.3.1.480.515
1kuxCA3Serotonin N-acetyltransferase/0.479
1cjwCOTSerotonin N-acetyltransferase/0.469
4u9vACON-alpha-acetyltransferase 402.3.10.466
1ib1COTSerotonin N-acetyltransferase/0.460