scPDB - Distribution of Binding site Similarity values of 1qp8 entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
1qp8	NDP	2-hydroxyacid dehydrogenase

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
1qp8	NDP	2-hydroxyacid dehydrogenase	/	1.000
5j23	A2R	Putative 2-hydroxyacid dehydrogenase	/	0.484
2gcg	NDP	Glyoxylate reductase/hydroxypyruvate reductase	1.1.1.79	0.478
2w2l	NAD	D-mandelate dehydrogenase	/	0.477
4fm8	0UQ	Beta-secretase 1	3.4.23.46	0.464
1adf	TAD	Alcohol dehydrogenase E chain	1.1.1.1	0.446