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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1q45FMN12-oxophytodienoate reductase 31.3.1.42

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1q45FMN12-oxophytodienoate reductase 31.3.1.421.000
3hgoFMN12-oxophytodienoate reductase 31.3.1.420.657
3hgsFMN12-oxophytodienoate reductase 31.3.1.420.651
2hs8FMN12-oxophytodienoate reductase 31.3.1.420.626
1icpFMN12-oxophytodienoate reductase 11.3.1.420.622
1icsFMN12-oxophytodienoate reductase 11.3.1.420.583
3hgrFMN12-oxophytodienoate reductase 11.3.1.420.581
1icqFMN12-oxophytodienoate reductase 11.3.1.420.577
1vyrFMNPentaerythritol tetranitrate reductase/0.565
3f03FMNPentaerythritol tetranitrate reductase/0.562
2q3oFMN12-oxophytodienoate reductase 31.3.1.420.558
4tmbFMNOld yellow enzyme/0.556
3p74FMNPentaerythritol tetranitrate reductase/0.554
2abbFMNPentaerythritol tetranitrate reductase/0.545
1h63FMNPentaerythritol tetranitrate reductase/0.544
1vjiFMN12-oxophytodienoate reductase 11.3.1.420.544
2hs6FMN12-oxophytodienoate reductase 31.3.1.420.544
1h50FMNPentaerythritol tetranitrate reductase/0.541
2q3rFMN12-oxophytodienoate reductase 11.3.1.420.531
3p62FMNPentaerythritol tetranitrate reductase/0.526
4rnvFMNNADPH dehydrogenase 11.6.99.10.524
1h51FMNPentaerythritol tetranitrate reductase/0.521
3p82FMNPentaerythritol tetranitrate reductase/0.518
4rnuFMNNADPH dehydrogenase 11.6.99.10.515
4jicFMNGTN Reductase/0.512
3p67FMNPentaerythritol tetranitrate reductase/0.493
4a3uFMNNADH:flavin oxidoreductase/NADH oxidase/0.488
3gkaFMNN-ethylmaleimide reductase/0.486
3atyFMNProstaglandin F2a synthase/0.485
4e2dFMNDehydrogenase/0.479
3atzFMNProstaglandin F2a synthase/0.478
4e2bFMNDehydrogenase/0.477
3p8iFMNPentaerythritol tetranitrate reductase/0.464
4tmcFMNOld yellow enzyme/0.463
4m5pFMNNADPH dehydrogenase/0.462
1bwkFMNNADPH dehydrogenase 11.6.99.10.459
3p84FMNPentaerythritol tetranitrate reductase/0.459
3l5lFMNXenobiotic reductase/0.458
4rnwFMNNADPH dehydrogenase 11.6.99.10.456
4df2FMNNADPH dehydrogenase/0.455
1oyaFMNNADPH dehydrogenase 11.6.99.10.450
3tjlFMNNADPH dehydrogenase/0.450
3p8jFMNPentaerythritol tetranitrate reductase/0.448
1bwlFMNNADPH dehydrogenase 11.6.99.10.445
1z44FMNNADPH dehydrogenase/0.444
5a4kFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.444
3n19FNRXenobiotic reductase/0.442
4h6kFMNNADPH dehydrogenase 11.6.99.10.442