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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1ngeATPHeat shock cognate 71 kDa protein

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
1ngeATPHeat shock cognate 71 kDa protein/1.000
1ngiANPHeat shock cognate 71 kDa protein/0.682
1nghATPHeat shock cognate 71 kDa protein/0.665
1atrADPHeat shock cognate 71 kDa protein/0.578
1ngcADPHeat shock cognate 71 kDa protein/0.540
2qwqADPHeat shock cognate 71 kDa protein/0.526
3hscADPHeat shock cognate 71 kDa protein/0.522
1ngbADPHeat shock cognate 71 kDa protein/0.505
2qwrANPHeat shock cognate 71 kDa protein/0.505
3ldlATP78 kDa glucose-regulated protein/0.491
3ldoANP78 kDa glucose-regulated protein/0.490
1ngjANPHeat shock cognate 71 kDa protein/0.459
1atsADPHeat shock cognate 71 kDa protein/0.445
3fe1ADPHeat shock 70 kDa protein 6/0.442