Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1n2hPAJPantothenate synthetase6.3.2.1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1n2hPAJPantothenate synthetase6.3.2.11.000
1n2iPAJPantothenate synthetase6.3.2.10.637
3cow52HPantothenate synthetase6.3.2.10.610
3coy53HPantothenate synthetase6.3.2.10.609
3ivxFG6Pantothenate synthetase6.3.2.10.569
3ioeA7DPantothenate synthetase6.3.2.10.559
5kwvANPPantothenate synthetase/0.551
1n2eAPCPantothenate synthetase6.3.2.10.548
3coz54HPantothenate synthetase6.3.2.10.539
3isjA8DPantothenate synthetase6.3.2.10.530
3iocA5DPantothenate synthetase6.3.2.10.523
2x3fAPCPantothenate synthetase/0.522
3ivgFG5Pantothenate synthetase6.3.2.10.522
5hg0SAMPantothenate synthetase/0.513
1n2gAPCPantothenate synthetase6.3.2.10.505
3ivcFG4Pantothenate synthetase6.3.2.10.499
3ag6PAJPantothenate synthetase/0.498
3imeBZ2Pantothenate synthetase6.3.2.10.485
3imgBZ2Pantothenate synthetase6.3.2.10.473
3zxiTYATyrosine--tRNA ligase, mitochondrial6.1.1.10.468
3iodA6DPantothenate synthetase6.3.2.10.463
3iobA4DPantothenate synthetase6.3.2.10.459
4wsoNADProbable nicotinate-nucleotide adenylyltransferase/0.454