scPDB - Distribution of Binding site Similarity values of 1map entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
1map	KET	Aspartate aminotransferase, mitochondrial	2.6.1.1

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
1map	KET	Aspartate aminotransferase, mitochondrial	2.6.1.1	1.000
1maq	PGU	Aspartate aminotransferase, mitochondrial	2.6.1.1	0.744
1ivr	CBA	Aspartate aminotransferase, mitochondrial	2.6.1.1	0.638
3qpg	3QP	Aspartate aminotransferase	2.6.1.1	0.620
1akc	PPE	Aspartate aminotransferase, mitochondrial	2.6.1.1	0.609
1akb	PPD	Aspartate aminotransferase, mitochondrial	2.6.1.1	0.600
4dbc	3QP	Aspartate aminotransferase	2.6.1.1	0.575
1cq8	PY6	Aspartate aminotransferase	2.6.1.1	0.563
1cq7	PY5	Aspartate aminotransferase	2.6.1.1	0.542
1cq6	PY4	Aspartate aminotransferase	2.6.1.1	0.516
1toi	HCI	Aspartate aminotransferase	2.6.1.1	0.515
1toj	HCI	Aspartate aminotransferase	2.6.1.1	0.479
1asc	NPL	Aspartate aminotransferase	2.6.1.1	0.470
1ahg	TYR_PLP	Aspartate aminotransferase	2.6.1.1	0.468