scPDB - Distribution of Binding site Similarity values of 1m4d entry / Site 2

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
1m4d	COA	Aminoglycoside 2'-N-acetyltransferase	2.3.1

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
1m4d	COA	Aminoglycoside 2'-N-acetyltransferase	2.3.1	1.000
1m4i	COA	Aminoglycoside 2'-N-acetyltransferase	2.3.1	0.541
3r1k	COA	N-acetyltransferase Eis	/	0.492
3sxn	COA	N-acetyltransferase Eis	/	0.485
3ryo	ACO	N-acetyltransferase Eis	/	0.480
2a4n	COA	Aac(6')-Ii protein	/	0.475
1b87	ACO	Aac(6')-Ii protein	/	0.460
3pgp	ACO	Uncharacterized protein	/	0.458
3tfy	COA	N-alpha-acetyltransferase 50	2.3.1	0.449
1wwz	ACO	Uncharacterized protein	/	0.441
2ob0	ACO	N-alpha-acetyltransferase 50	/	0.441
3te4	ACO	Dopamine N-acetyltransferase	/	0.440