scPDB - Distribution of Binding site Similarity values of 1kzu entry / Site 6

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
1kzu	RG1	Light-harvesting protein B-800/850 alpha chain

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
1kzu	RG1	Light-harvesting protein B-800/850 alpha chain	/	1.000
1kzu	RG1	Light-harvesting protein B-800/850 beta chain	/	1.000
1nkz	RG1	Light-harvesting protein B-800/850 alpha chain	/	0.560
1nkz	RG1	Light-harvesting protein B-800/850 beta chain	/	0.560
1rrm	APR	Lactaldehyde reductase	1.1.1.77	0.445
2y05	NAP	Prostaglandin reductase 1	/	0.441