scPDB - Distribution of Binding site Similarity values of 1ky8 entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
1ky8	NAP	NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
1ky8	NAP	NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase	/	1.000
1uxv	NAP	NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase	/	0.640
1uxr	NAP	NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase	/	0.623
4pxn	NAD	Aldehyde dehydrogenase family 7 member B4	/	0.498
1uxp	NAP	NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase	/	0.461
3rhl	NAP	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1.5.1.6	0.441