scPDB - Distribution of Binding site Similarity values of 1i6l entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
1i6l	TYM	Tryptophan--tRNA ligase	6.1.1.2

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
1i6l	TYM	Tryptophan--tRNA ligase	6.1.1.2	1.000
1i6k	TYM	Tryptophan--tRNA ligase	6.1.1.2	0.647
2yy5	WSA	Tryptophan--tRNA ligase	6.1.1.2	0.525
1r6u	TYM	Tryptophan--tRNA ligase, cytoplasmic	6.1.1.2	0.473
3kt3	TYM	Tryptophan--tRNA ligase, cytoplasmic	6.1.1.2	0.468
5hg0	SAM	Pantothenate synthetase	/	0.452
2pid	YSA	Tyrosine--tRNA ligase, mitochondrial	6.1.1.1	0.441