Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1h81FADPolyamine oxidase1.5.3.14

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1h81FADPolyamine oxidase1.5.3.141.000
3kpfFADPolyamine oxidase1.5.3.140.587
2uxxFAJLysine-specific histone demethylase 1A10.543
1xpqFADPolyamine oxidase FMS1/0.539
3cndFADPolyamine oxidase FMS1/0.538
2iw5FADLysine-specific histone demethylase 1A10.530
3cntFADPolyamine oxidase FMS1/0.515
3cn8FADPolyamine oxidase FMS1/0.504
5l3dFADLysine-specific histone demethylase 1A10.494
4echFADPolyamine oxidase FMS1/0.493
3rhaFDAPutrescine oxidase/0.492
4fwjFADLysine-specific histone demethylase 1B10.492
3zdnFADMonoamine oxidase N1.4.3.40.491
2jb2FADL-amino acid oxidase/0.473
3k7tFAD6-hydroxy-L-nicotine oxidase/0.471
3vqrFADPutative oxidoreductase/0.469
1sezFADProtoporphyrinogen oxidase, mitochondrial1.3.3.40.467
2babFADPutative aminooxidase/0.467
2yg7FADPutrescine oxidase/0.466
4guuFA9Lysine-specific histone demethylase 1B10.465
4i58FADCyclohexylamine Oxidase/0.462
3qj4FADRenalase/0.455
1bzlFADTrypanothione reductase1.8.1.120.452
2ba9FADPutative aminooxidase/0.449
2jb1FADL-amino acid oxidase/0.449
2rgoFADAlpha-Glycerophosphate Oxidase/0.447
1cc2FADCholesterol oxidase1.1.3.60.444
1v0jFADUDP-galactopyranose mutase5.4.99.90.443
2yr4FADPhenylalanine 2-monooxygenase precursor1.13.12.90.442
1d4dFADFumarate reductase flavoprotein subunit1.3.5.40.441
2bacFADPutative aminooxidase/0.441
4qi5FADCellobiose dehydrogenase/0.441
3bi2FADPolyamine oxidase FMS1/0.440