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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1h63FMNPentaerythritol tetranitrate reductase

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1h63FMNPentaerythritol tetranitrate reductase/1.000
3f03FMNPentaerythritol tetranitrate reductase/0.683
2abbFMNPentaerythritol tetranitrate reductase/0.657
3p74FMNPentaerythritol tetranitrate reductase/0.656
1h50FMNPentaerythritol tetranitrate reductase/0.627
3p8jFMNPentaerythritol tetranitrate reductase/0.592
3p62FMNPentaerythritol tetranitrate reductase/0.591
3p84FMNPentaerythritol tetranitrate reductase/0.585
3p82FMNPentaerythritol tetranitrate reductase/0.582
1h51FMNPentaerythritol tetranitrate reductase/0.562
1icqFMN12-oxophytodienoate reductase 11.3.1.420.561
1vyrFMNPentaerythritol tetranitrate reductase/0.558
1icsFMN12-oxophytodienoate reductase 11.3.1.420.555
3hgoFMN12-oxophytodienoate reductase 31.3.1.420.546
3p8iFMNPentaerythritol tetranitrate reductase/0.544
3p67FMNPentaerythritol tetranitrate reductase/0.540
1icpFMN12-oxophytodienoate reductase 11.3.1.420.535
4jicFMNGTN Reductase/0.531
3hgrFMN12-oxophytodienoate reductase 11.3.1.420.530
3hgsFMN12-oxophytodienoate reductase 31.3.1.420.525
2hs8FMN12-oxophytodienoate reductase 31.3.1.420.523
1q45FMN12-oxophytodienoate reductase 31.3.1.420.509
1vjiFMN12-oxophytodienoate reductase 11.3.1.420.508
4rnvFMNNADPH dehydrogenase 11.6.99.10.507
4tmbFMNOld yellow enzyme/0.495
4e2bFMNDehydrogenase/0.489
4e2dFMNDehydrogenase/0.489
2q3rFMN12-oxophytodienoate reductase 11.3.1.420.488
3atzFMNProstaglandin F2a synthase/0.487
3gkaFMNN-ethylmaleimide reductase/0.485
2hs6FMN12-oxophytodienoate reductase 31.3.1.420.483
1bwlFMNNADPH dehydrogenase 11.6.99.10.480
4df2FMNNADPH dehydrogenase/0.471
4rnuFMNNADPH dehydrogenase 11.6.99.10.470
4m5pFMNNADPH dehydrogenase/0.467
3tjlFMNNADPH dehydrogenase/0.464
4rnwFMNNADPH dehydrogenase 11.6.99.10.464
1oyaFMNNADPH dehydrogenase 11.6.99.10.463
4a3uFMNNADH:flavin oxidoreductase/NADH oxidase/0.462
1oycFMNNADPH dehydrogenase 11.6.99.10.456
3atyFMNProstaglandin F2a synthase/0.455
2q3oFMN12-oxophytodienoate reductase 31.3.1.420.454
1bwkFMNNADPH dehydrogenase 11.6.99.10.453
4awtFMNNADH:flavin oxidoreductase Sye1/0.449
4rnxFMNNADPH dehydrogenase 11.6.99.10.448
4h6kFMNNADPH dehydrogenase 11.6.99.10.447
1z44FMNNADPH dehydrogenase/0.443
1z41FMNNADPH dehydrogenase/0.442