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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1h50FMNPentaerythritol tetranitrate reductase

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1h50FMNPentaerythritol tetranitrate reductase/1.000
1vyrFMNPentaerythritol tetranitrate reductase/0.664
2abbFMNPentaerythritol tetranitrate reductase/0.619
3p74FMNPentaerythritol tetranitrate reductase/0.615
1h63FMNPentaerythritol tetranitrate reductase/0.614
3f03FMNPentaerythritol tetranitrate reductase/0.605
3p8iFMNPentaerythritol tetranitrate reductase/0.601
3p82FMNPentaerythritol tetranitrate reductase/0.575
3p84FMNPentaerythritol tetranitrate reductase/0.571
3p62FMNPentaerythritol tetranitrate reductase/0.563
1h51FMNPentaerythritol tetranitrate reductase/0.558
3p8jFMNPentaerythritol tetranitrate reductase/0.549
3p67FMNPentaerythritol tetranitrate reductase/0.529
4jicFMNGTN Reductase/0.508
1icpFMN12-oxophytodienoate reductase 11.3.1.420.502
1icqFMN12-oxophytodienoate reductase 11.3.1.420.499
3hgrFMN12-oxophytodienoate reductase 11.3.1.420.496
4tmbFMNOld yellow enzyme/0.491
3hgoFMN12-oxophytodienoate reductase 31.3.1.420.489
3hgsFMN12-oxophytodienoate reductase 31.3.1.420.489
1bwlFMNNADPH dehydrogenase 11.6.99.10.488
1vjiFMN12-oxophytodienoate reductase 11.3.1.420.483
1icsFMN12-oxophytodienoate reductase 11.3.1.420.482
2hs8FMN12-oxophytodienoate reductase 31.3.1.420.479
3gkaFMNN-ethylmaleimide reductase/0.471
1q45FMN12-oxophytodienoate reductase 31.3.1.420.464
4e2dFMNDehydrogenase/0.458
4df2FMNNADPH dehydrogenase/0.455
3tjlFMNNADPH dehydrogenase/0.454
4h6kFMNNADPH dehydrogenase 11.6.99.10.453
4m5pFMNNADPH dehydrogenase/0.452
4e2bFMNDehydrogenase/0.449
1oyaFMNNADPH dehydrogenase 11.6.99.10.448
3atzFMNProstaglandin F2a synthase/0.448
1oycFMNNADPH dehydrogenase 11.6.99.10.440