scPDB - Distribution of Binding site Similarity values of 1fjx entry / Site 1

Distribution of Binding site similarity measured by Shaper

You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
1fjx	SAH	Modification methylase HhaI	2.1.1.37

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
1fjx	SAH	Modification methylase HhaI	2.1.1.37	1.000
1mht	SAH	Modification methylase HhaI	2.1.1.37	0.666
7mht	SAH	Modification methylase HhaI	2.1.1.37	0.636
1skm	SAH	Modification methylase HhaI	2.1.1.37	0.634
9mht	SAH	Modification methylase HhaI	2.1.1.37	0.620
5mht	SAH	Modification methylase HhaI	2.1.1.37	0.599
2c7q	SAH	Modification methylase HhaI	2.1.1.37	0.594
2uyh	SAH	Modification methylase HhaI	2.1.1.37	0.590
2z6u	SAH	Modification methylase HhaI	2.1.1.37	0.589
2zcj	SAH	Modification methylase HhaI	2.1.1.37	0.588
3mht	SAH	Modification methylase HhaI	2.1.1.37	0.587
10mh	SAH	Modification methylase HhaI	2.1.1.37	0.584
4mht	SAH	Modification methylase HhaI	2.1.1.37	0.562
8mht	SAH	Modification methylase HhaI	2.1.1.37	0.552
2i9k	SAH	Modification methylase HhaI	2.1.1.37	0.545
2hmy	SAM	Modification methylase HhaI	2.1.1.37	0.509