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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1e3lNADAlcohol dehydrogenase 41.1.1.1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1e3lNADAlcohol dehydrogenase 41.1.1.11.000
1f8fNADBenzyl alcohol dehydrogenase/0.510
1adcPADAlcohol dehydrogenase E chain1.1.1.10.493
1adbCNDAlcohol dehydrogenase E chain1.1.1.10.492
4dlbNADS-(hydroxymethyl)glutathione dehydrogenase/0.480
4jjiNADAlcohol dehydrogenase class-3/0.476
4dl9NADS-(hydroxymethyl)glutathione dehydrogenase/0.472
2ohxNADAlcohol dehydrogenase E chain1.1.1.10.471
2jhfNADAlcohol dehydrogenase E chain1.1.1.10.470
4ng5NAJAlcohol dehydrogenase E chain1.1.1.10.466
1cdoNADAlcohol dehydrogenase 11.1.1.10.462
1e3eNAIAlcohol dehydrogenase 41.1.1.10.460
4dwvNAJAlcohol dehydrogenase E chain1.1.1.10.459
1ht0NADAlcohol dehydrogenase 1C1.1.1.10.457
4gl4NAIAlcohol dehydrogenase class-3/0.453
4nfhNAJAlcohol dehydrogenase E chain1.1.1.10.453
4c4oNADSADH/0.450
3jv7NADSecondary alcohol dehydrogenase/0.447
1ma0NADAlcohol dehydrogenase class-31.1.1.10.446
1qlhNADAlcohol dehydrogenase E chain1.1.1.10.446
1agnNADAlcohol dehydrogenase class 4 mu/sigma chain1.1.1.10.445
1ldeNADAlcohol dehydrogenase E chain1.1.1.10.445
2fzeAPRAlcohol dehydrogenase class-31.1.1.10.445
2xaaNADSecondary alcohol dehydrogenase/0.442