scPDB - Distribution of Binding site Similarity values of 1dqa entry / Site 3

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
1dqa	COA	3-hydroxy-3-methylglutaryl-coenzyme A reductase	1.1.1.34

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
1dqa	COA	3-hydroxy-3-methylglutaryl-coenzyme A reductase	1.1.1.34	1.000
4bfw	ZVW	Pantothenate kinase	2.7.1.33	0.464
1yhj	R6C	Pyridoxal kinase	2.7.1.35	0.462
4bfu	ZVU	Pantothenate kinase	2.7.1.33	0.458
4iah	1DX	Alr2278 protein	/	0.454
1rft	PXM	Pyridoxal kinase	2.7.1.35	0.450
1c3x	8IG	Purine nucleoside phosphorylase	2.4.2.1	0.448
1c7o	PPG	Hemolysin	/	0.446
3l6j	Z90	Alr2278 protein	/	0.446
3ckq	UPG	Glucosyl-3-phosphoglycerate synthase	2.4.1.266	0.445
4bfv	ZVV	Pantothenate kinase	2.7.1.33	0.445
4bft	ZVT	Pantothenate kinase	2.7.1.33	0.444
4j8t	DOG	Uncharacterized PhzA/B-like protein PA3332	/	0.444
1t4c	COA	Formyl-CoA:oxalate CoA-transferase	/	0.443
3vf6	0H6	Glucokinase	2.7.1.2	0.442
2ea4	F79	Methionine aminopeptidase 2	/	0.440