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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1aquESTEstrogen sulfotransferase, testis isoform2.8.2.4

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1aquESTEstrogen sulfotransferase, testis isoform2.8.2.41.000
4jvmXDIEstrogen sulfotransferase2.8.2.40.515
1g3mPCQEstrogen sulfotransferase2.8.2.40.505
4jvnYUGEstrogen sulfotransferase2.8.2.40.505
4jvlESTEstrogen sulfotransferase2.8.2.40.498
2yneYNEGlycylpeptide N-tetradecanoyltransferase/0.443