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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1agnNADAlcohol dehydrogenase class 4 mu/sigma chain1.1.1.1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1agnNADAlcohol dehydrogenase class 4 mu/sigma chain1.1.1.11.000
1adcPADAlcohol dehydrogenase E chain1.1.1.10.569
2jhfNADAlcohol dehydrogenase E chain1.1.1.10.566
2ohxNADAlcohol dehydrogenase E chain1.1.1.10.552
1a71NADAlcohol dehydrogenase E chain1.1.1.10.543
1adbCNDAlcohol dehydrogenase E chain1.1.1.10.535
4nfhNAJAlcohol dehydrogenase E chain1.1.1.10.530
1axgNADAlcohol dehydrogenase E chain1.1.1.10.528
1ht0NADAlcohol dehydrogenase 1C1.1.1.10.524
4dwvNAJAlcohol dehydrogenase E chain1.1.1.10.515
1axeNADAlcohol dehydrogenase E chain1.1.1.10.509
4ng5NAJAlcohol dehydrogenase E chain1.1.1.10.507
2oxiNADAlcohol dehydrogenase E chain1.1.1.10.505
1mgoNADAlcohol dehydrogenase E chain1.1.1.10.498
5cdsNAJAlcohol dehydrogenase E chain1.1.1.10.494
1hszNADAlcohol dehydrogenase 1B1.1.1.10.493
1ldeNADAlcohol dehydrogenase E chain1.1.1.10.491
1u3vNADAlcohol dehydrogenase 1B1.1.1.10.491
4dlbNADS-(hydroxymethyl)glutathione dehydrogenase/0.483
1ma0NADAlcohol dehydrogenase class-31.1.1.10.467
1e3lNADAlcohol dehydrogenase 41.1.1.10.460
4cpdNADAlcohol dehydrogenase/0.453
1hldNADAlcohol dehydrogenase E chain1.1.1.10.450
1heuNADAlcohol dehydrogenase E chain1.1.1.10.449
4c4oNADSADH/0.447
2xaaNADSecondary alcohol dehydrogenase/0.442