Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1adfTADAlcohol dehydrogenase E chain1.1.1.1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1adfTADAlcohol dehydrogenase E chain1.1.1.11.000
1qlhNADAlcohol dehydrogenase E chain1.1.1.10.590
1a72PADAlcohol dehydrogenase E chain1.1.1.10.548
5adhAPRAlcohol dehydrogenase E chain1.1.1.10.499
1f8fNADBenzyl alcohol dehydrogenase/0.487
1tehNADAlcohol dehydrogenase class-31.1.1.10.468
1e3lNADAlcohol dehydrogenase 41.1.1.10.456
4dl9NADS-(hydroxymethyl)glutathione dehydrogenase/0.454
1e3eNAIAlcohol dehydrogenase 41.1.1.10.453
4jjiNADAlcohol dehydrogenase class-3/0.451
4rquNADAlcohol dehydrogenase class-P/0.450
3gfbNADL-threonine 3-dehydrogenase/0.440