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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
9gss GTX Glutathione S-transferase P 2.5.1.18

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
9gss GTXGlutathione S-transferase P 2.5.1.18 1.276
17gs GTXGlutathione S-transferase P 2.5.1.18 1.263
4gss GTXGlutathione S-transferase P 2.5.1.18 1.187
12gs 0HHGlutathione S-transferase P 2.5.1.18 1.158
2j9h GTXGlutathione S-transferase P 2.5.1.18 1.093
3pgt GBXGlutathione S-transferase P 2.5.1.18 0.995
1pgt GTXGlutathione S-transferase P 2.5.1.18 0.977
1aqv 0HGGlutathione S-transferase P 2.5.1.18 0.962
2pgt GPRGlutathione S-transferase P 2.5.1.18 0.909
3o76 GTBGlutathione S-transferase P 1 2.5.1.18 0.892
2glr GTXGlutathione S-transferase P 1 2.5.1.18 0.874
2oad GTBGlutathione S-transferase P 1 2.5.1.18 0.860
4pgt GBXGlutathione S-transferase P 2.5.1.18 0.860
1tu8 GTXGlutathione S-transferase 2 2.5.1.18 0.854
1gss LEEGlutathione S-transferase P 2.5.1.18 0.825
2a2s GSNGlutathione S-transferase P 2.5.1.18 0.814
1aqx GTDGlutathione S-transferase P 2.5.1.18 0.783
1gti GTBGlutathione S-transferase P 1 2.5.1.18 0.759
1gul GLY_GGL_ICYGlutathione S-transferase A4 2.5.1.18 0.749
2oac GTBGlutathione S-transferase P 1 2.5.1.18 0.733
1ml6 GBXGlutathione S-transferase A2 2.5.1.18 0.716
5agy GTBTau class glutathione S-transferase / 0.702
1b4p GPSGlutathione S-transferase Mu 2 / 0.690
2aaw GTXGlutathione S-transferase 2.5.1.18 0.687
2r6k GTXGlutathione S-transferase A1 2.5.1.18 0.650