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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
6gsw GPS Glutathione S-transferase Mu 1 2.5.1.18

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
6gsw GPSGlutathione S-transferase Mu 1 2.5.1.18 1.242
3gst GPRGlutathione S-transferase Mu 1 2.5.1.18 1.182
6gsx GPSGlutathione S-transferase Mu 1 2.5.1.18 1.098
6gsv GPSGlutathione S-transferase Mu 1 2.5.1.18 1.061
2gst GPSGlutathione S-transferase Mu 1 2.5.1.18 1.001
4gst GTDGlutathione S-transferase Mu 1 2.5.1.18 0.937
1b4p GPSGlutathione S-transferase Mu 2 / 0.919
1mtc GPRGlutathione S-transferase Mu 1 2.5.1.18 0.916
6gsu GPSGlutathione S-transferase Mu 1 2.5.1.18 0.871
5fwg GPRGlutathione S-transferase Mu 1 2.5.1.18 0.849
1hna GDNGlutathione S-transferase Mu 2 2.5.1.18 0.837
3fyg GPRGlutathione S-transferase Mu 1 2.5.1.18 0.783
2c4j GSOGlutathione S-transferase Mu 2 2.5.1.18 0.781
3gur BYGGlutathione S-transferase Mu 2 2.5.1.18 0.771
2f3m GTDGlutathione S-transferase Mu 1 2.5.1.18 0.766
3frc 0HGGlutathione S-transferase 2.5.1.18 0.762
1c72 EPYGlutathione S-transferase 2 2.5.1.18 0.760
1gsu GTXGlutathione S-transferase 2 2.5.1.18 0.734
2gsq GBIGlutathione S-transferase 2.5.1.18 0.726
1tu8 GTXGlutathione S-transferase 2 2.5.1.18 0.723
1m9a GTXGlutathione S-transferase class-mu 26 kDa isozyme 2.5.1.18 0.720
2aaw GTXGlutathione S-transferase 2.5.1.18 0.697
1q4j GTXGlutathione S-transferase 2.5.1.18 0.672
3ktl GTXGlutathione S-transferase A1 2.5.1.18 0.670
3l0h GTXGlutathione S-transferase A1 2.5.1.18 0.670
1aqv 0HGGlutathione S-transferase P 2.5.1.18 0.667
3o76 GTBGlutathione S-transferase P 1 2.5.1.18 0.667
2oad GTBGlutathione S-transferase P 1 2.5.1.18 0.666
2a2s GSNGlutathione S-transferase P 2.5.1.18 0.662
2glr GTXGlutathione S-transferase P 1 2.5.1.18 0.662
2pgt GPRGlutathione S-transferase P 2.5.1.18 0.656
4pgt GBXGlutathione S-transferase P 2.5.1.18 0.655
1gss LEEGlutathione S-transferase P 2.5.1.18 0.653
2oac GTBGlutathione S-transferase P 1 2.5.1.18 0.653