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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
6gsv GPS Glutathione S-transferase Mu 1 2.5.1.18

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
6gsv GPSGlutathione S-transferase Mu 1 2.5.1.18 1.268
6gsx GPSGlutathione S-transferase Mu 1 2.5.1.18 1.089
6gsw GPSGlutathione S-transferase Mu 1 2.5.1.18 1.061
2gst GPSGlutathione S-transferase Mu 1 2.5.1.18 1.045
1mtc GPRGlutathione S-transferase Mu 1 2.5.1.18 1.007
3gst GPRGlutathione S-transferase Mu 1 2.5.1.18 0.990
5fwg GPRGlutathione S-transferase Mu 1 2.5.1.18 0.947
1b4p GPSGlutathione S-transferase Mu 2 / 0.920
4gst GTDGlutathione S-transferase Mu 1 2.5.1.18 0.894
2c4j GSOGlutathione S-transferase Mu 2 2.5.1.18 0.885
6gsu GPSGlutathione S-transferase Mu 1 2.5.1.18 0.830
1m9a GTXGlutathione S-transferase class-mu 26 kDa isozyme 2.5.1.18 0.829
3gur BYGGlutathione S-transferase Mu 2 2.5.1.18 0.822
1hna GDNGlutathione S-transferase Mu 2 2.5.1.18 0.820
2f3m GTDGlutathione S-transferase Mu 1 2.5.1.18 0.790
1gsu GTXGlutathione S-transferase 2 2.5.1.18 0.784
1c72 EPYGlutathione S-transferase 2 2.5.1.18 0.757
3fyg GPRGlutathione S-transferase Mu 1 2.5.1.18 0.728
2aaw GTXGlutathione S-transferase 2.5.1.18 0.725
2oad GTBGlutathione S-transferase P 1 2.5.1.18 0.725
1tu8 GTXGlutathione S-transferase 2 2.5.1.18 0.719
1aqv 0HGGlutathione S-transferase P 2.5.1.18 0.718
2pgt GPRGlutathione S-transferase P 2.5.1.18 0.716
3o76 GTBGlutathione S-transferase P 1 2.5.1.18 0.714
4pgt GBXGlutathione S-transferase P 2.5.1.18 0.709
2oac GTBGlutathione S-transferase P 1 2.5.1.18 0.708
2r6k GTXGlutathione S-transferase A1 2.5.1.18 0.692
1q4j GTXGlutathione S-transferase 2.5.1.18 0.689
2a2s GSNGlutathione S-transferase P 2.5.1.18 0.687
3frc 0HGGlutathione S-transferase 2.5.1.18 0.685
4h8i 11WGlutamate receptor ionotropic, kainate 2 / 0.655