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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
6gsu GPS Glutathione S-transferase Mu 1 2.5.1.18

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
6gsu GPSGlutathione S-transferase Mu 1 2.5.1.18 1.234
2gst GPSGlutathione S-transferase Mu 1 2.5.1.18 0.961
3gst GPRGlutathione S-transferase Mu 1 2.5.1.18 0.930
4gst GTDGlutathione S-transferase Mu 1 2.5.1.18 0.922
6gsx GPSGlutathione S-transferase Mu 1 2.5.1.18 0.904
1mtc GPRGlutathione S-transferase Mu 1 2.5.1.18 0.898
2c4j GSOGlutathione S-transferase Mu 2 2.5.1.18 0.894
1b4p GPSGlutathione S-transferase Mu 2 / 0.890
6gsw GPSGlutathione S-transferase Mu 1 2.5.1.18 0.871
1hna GDNGlutathione S-transferase Mu 2 2.5.1.18 0.853
6gsv GPSGlutathione S-transferase Mu 1 2.5.1.18 0.830
3gur BYGGlutathione S-transferase Mu 2 2.5.1.18 0.824
1gsu GTXGlutathione S-transferase 2 2.5.1.18 0.801
2f3m GTDGlutathione S-transferase Mu 1 2.5.1.18 0.795
1m9a GTXGlutathione S-transferase class-mu 26 kDa isozyme 2.5.1.18 0.782
3frc 0HGGlutathione S-transferase 2.5.1.18 0.726
2oad GTBGlutathione S-transferase P 1 2.5.1.18 0.723
3fyg GPRGlutathione S-transferase Mu 1 2.5.1.18 0.710
5fwg GPRGlutathione S-transferase Mu 1 2.5.1.18 0.689
1gul GLY_GGL_ICYGlutathione S-transferase A4 2.5.1.18 0.683
1c72 EPYGlutathione S-transferase 2 2.5.1.18 0.677
1gss LEEGlutathione S-transferase P 2.5.1.18 0.669
1aqv 0HGGlutathione S-transferase P 2.5.1.18 0.668
4pgt GBXGlutathione S-transferase P 2.5.1.18 0.662
2a2s GSNGlutathione S-transferase P 2.5.1.18 0.661
3f63 GTXGlutathione transferase GST1-4 / 0.661