scPDB - Distribution of Binding mode Similarity values of 5fsi entry / Site 1

Distribution of Interaction pattern similarity measured by Grim

You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
5fsi	8DG	7,8-dihydro-8-oxoguanine triphosphatase	3.6.1.55

Complex with similar interaction patterns:

PDB ID	HET	Uniprot Name	EC Number	Binding Mode Similarity
5fsi	8DG	7,8-dihydro-8-oxoguanine triphosphatase	3.6.1.55	1.061
4dlz	GNP	GTPase HRas	/	0.663
3tnf	GNP	Ras-related protein Rab-8A	/	0.659
1mf0	GDP	Adenylosuccinate synthetase isozyme 1	/	0.652
1yzq	GNP	Ras-related protein Rab-6A	/	0.651