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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
5epo TUD 7-alpha-hydroxysteroid deydrogenase

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
5epo TUD7-alpha-hydroxysteroid deydrogenase / 1.185
2qo5 CHDFatty acid-binding protein 10-A, liver basic / 0.699
2aa6 STRMineralocorticoid receptor / 0.690
3zqt TESAndrogen receptor / 0.669
3up0 D7SaceDAF-12 / 0.667
4pxm ESTEstrogen receptor / 0.663
2mm3 CHOGastrotropin / 0.660
3gki CLRNiemann-Pick C1 protein / 0.659
1ya3 STRMineralocorticoid receptor / 0.658
2aa2 AS4Mineralocorticoid receptor / 0.657
4bqu CLRJapanin / 0.656
2q7i TESAndrogen receptor / 0.652
5hyr ESTEstrogen receptor / 0.652
2j7x ESTEstrogen receptor beta / 0.651
2k62 ITLFatty acid-binding protein, liver / 0.651