Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
5cfp C2E Stimulator of interferon genes protein

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
5cfp C2EStimulator of interferon genes protein / 0.947
4f5y C2EStimulator of interferon genes protein / 0.718
4f9g C2EStimulator of interferon genes protein / 0.710
5cfl C2EStimulator of interferon genes protein / 0.701
4emt C2EStimulator of interferon genes protein / 0.698
4ef4 C2EStimulator of interferon genes protein / 0.697