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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4ug9 1EW Nitric oxide synthase oxygenase 1.14.13.165

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4ug9 1EWNitric oxide synthase oxygenase 1.14.13.165 0.810
4ug7 1EVNitric oxide synthase oxygenase 1.14.13.165 0.762
4uga Q05Nitric oxide synthase oxygenase 1.14.13.165 0.755
3n60 XFNNitric oxide synthase, brain 1.14.13.39 0.743
4lwb QJ8Nitric oxide synthase oxygenase 1.14.13.165 0.730
4ug5 XFKNitric oxide synthase oxygenase 1.14.13.165 0.721
3n62 XFJNitric oxide synthase, brain 1.14.13.39 0.720
3n63 XFNNitric oxide synthase, brain 1.14.13.39 0.711
4lwa Q13Nitric oxide synthase oxygenase 1.14.13.165 0.711
3n66 XFNNitric oxide synthase, brain 1.14.13.39 0.708
3jwu J11Nitric oxide synthase, brain 1.14.13.39 0.707
3jx4 J11Nitric oxide synthase, brain 1.14.13.39 0.707
3n61 XFJNitric oxide synthase, brain 1.14.13.39 0.707
4jsg Q10Nitric oxide synthase, brain 1.14.13.39 0.706
4jsh Q15Nitric oxide synthase, brain 1.14.13.39 0.700
4imw 1EVNitric oxide synthase, brain 1.14.13.39 0.699
4imt 1EWNitric oxide synthase, brain 1.14.13.39 0.698
3nlr JRSNitric oxide synthase, brain 1.14.13.39 0.697
3ufr H5WNitric oxide synthase, brain 1.14.13.39 0.697
4jsi Q05Nitric oxide synthase, brain 1.14.13.39 0.696
3jws JI4Nitric oxide synthase, brain 1.14.13.39 0.693
3n5x XFKNitric oxide synthase, brain 1.14.13.39 0.690
3jx0 JI4Nitric oxide synthase, brain 1.14.13.39 0.689
4imu 1ETNitric oxide synthase, brain 1.14.13.39 0.689
3n5v XFHNitric oxide synthase, brain 1.14.13.39 0.687
4k5d 1Q6Nitric oxide synthase, brain 1.14.13.39 0.687
3nlp JSSNitric oxide synthase, brain 1.14.13.39 0.686
3n5z XFMNitric oxide synthase, brain 1.14.13.39 0.685
3n65 XFJNitric oxide synthase, brain 1.14.13.39 0.682
3nln JRSNitric oxide synthase, brain 1.14.13.39 0.682
3ufq HW5Nitric oxide synthase, brain 1.14.13.39 0.682
3ufo HW4Nitric oxide synthase, brain 1.14.13.39 0.677
3nlo JSRNitric oxide synthase, brain 1.14.13.39 0.676
4jsf QJ4Nitric oxide synthase, brain 1.14.13.39 0.676
3b3p JI7Nitric oxide synthase, brain 1.14.13.39 0.674
3e68 AT6Nitric oxide synthase, inducible 1.14.13.39 0.673
4k5f Q14Nitric oxide synthase, brain 1.14.13.39 0.673
3jx5 J14Nitric oxide synthase, brain 1.14.13.39 0.670
4jse QJ2Nitric oxide synthase, brain 1.14.13.39 0.670
4lux QJ8Nitric oxide synthase, brain 1.14.13.39 0.669
3n5y XFLNitric oxide synthase, brain 1.14.13.39 0.668
4k5e 1Q7Nitric oxide synthase, brain 1.14.13.39 0.668
3n5w XFJNitric oxide synthase, brain 1.14.13.39 0.667
3tym 08RNitric oxide synthase, brain 1.14.13.39 0.666
3nlw 3XFNitric oxide synthase, brain 1.14.13.39 0.665
3tyl AXWNitric oxide synthase, brain 1.14.13.39 0.665
4k5g Q13Nitric oxide synthase, brain 1.14.13.39 0.665
4jsj QJ7Nitric oxide synthase, brain 1.14.13.39 0.664
3jx2 JI4Nitric oxide synthase, brain 1.14.13.39 0.663
3ufp H4WNitric oxide synthase, brain 1.14.13.39 0.663
3nlv 3XANitric oxide synthase, brain 1.14.13.39 0.662
3nlk JSSNitric oxide synthase, brain 1.14.13.39 0.660
3b3o JI3Nitric oxide synthase, brain 1.14.13.39 0.653
1m9j CLWNitric oxide synthase, endothelial 1.14.13.39 0.651