sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 4udq | FAD | 5-(hydroxymethyl)furfural oxidase |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 4udq | FAD | 5-(hydroxymethyl)furfural oxidase | / | 1.502 | |
| 4udr | FAD | 5-(hydroxymethyl)furfural oxidase | / | 1.442 | |
| 4z24 | FAD | Putative GMC-type oxidoreductase R135 | 1 | 1.025 | |
| 4z26 | FAD | Putative GMC-type oxidoreductase R135 | 1 | 0.959 | |
| 3t37 | FAD | Pyridoxine 4-oxidase | / | 0.929 | |
| 3qvp | FAD | Glucose oxidase | 1.1.3.4 | 0.900 | |
| 4qi5 | FAD | Cellobiose dehydrogenase | / | 0.899 | |
| 3qvr | FAD | Glucose oxidase | 1.1.3.4 | 0.887 | |
| 1gal | FAD | Glucose oxidase | 1.1.3.4 | 0.885 | |
| 5hsa | FAS | Alcohol oxidase 1 | 1.1.3.13 | 0.877 | |
| 1b4v | FAD | Cholesterol oxidase | 1.1.3.6 | 0.870 | |
| 3cox | FAD | Cholesterol oxidase | 1.1.3.6 | 0.870 | |
| 4xwr | FAD | Cholesterol oxidase | 1.1.3.6 | 0.867 | |
| 1n4u | FAE | Cholesterol oxidase | 1.1.3.6 | 0.866 | |
| 3gyj | FAD | Cholesterol oxidase | 1.1.3.6 | 0.866 | |
| 3gdp | FAD | (R)-mandelonitrile lyase 2 | 4.1.2.10 | 0.865 | |
| 4qi4 | FAD | Cellobiose dehydrogenase | / | 0.863 | |
| 1cbo | FAD | Cholesterol oxidase | 1.1.3.6 | 0.855 | |
| 1n1p | FAD | Cholesterol oxidase | 1.1.3.6 | 0.852 | |
| 3cnj | FAD | Cholesterol oxidase | 1.1.3.6 | 0.852 | |
| 4rek | FAD | Cholesterol oxidase | 1.1.3.6 | 0.852 | |
| 1ju2 | FAD | (R)-mandelonitrile lyase 2 | 4.1.2.10 | 0.848 | |
| 1gpe | FAD | Glucose oxidase | 1.1.3.4 | 0.847 | |
| 3q9t | FAY | Uncharacterized protein | / | 0.844 | |
| 1ijh | FAD | Cholesterol oxidase | 1.1.3.6 | 0.842 | |
| 4u2t | FAD | Cholesterol oxidase | 1.1.3.6 | 0.840 | |
| 1b8s | FAD | Cholesterol oxidase | 1.1.3.6 | 0.839 | |
| 4ynt | FDA | Glucose oxidase, putative | / | 0.838 | |
| 4xxg | FAD | Cholesterol oxidase | 1.1.3.6 | 0.836 | |
| 5fs8 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.835 | |
| 5eb5 | FAD | (R)-mandelonitrile lyase 1 | 4.1.2.10 | 0.832 | |
| 3nlc | FAD | Uncharacterized protein | / | 0.828 | |
| 1cc2 | FAD | Cholesterol oxidase | 1.1.3.6 | 0.821 | |
| 3lxd | FAD | FAD-dependent pyridine nucleotide-disulfide oxidoreductase | / | 0.818 | |
| 1cf3 | FAD | Glucose oxidase | 1.1.3.4 | 0.816 | |
| 1bwc | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.813 | |
| 4qi7 | FAD | Cellobiose dehydrogenase | / | 0.809 | |
| 2gew | FAD | Cholesterol oxidase | 1.1.3.6 | 0.808 | |
| 3gyi | FAD | Cholesterol oxidase | 1.1.3.6 | 0.808 | |
| 4u2s | FDA | Cholesterol oxidase | 1.1.3.6 | 0.807 | |
| 3m12 | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.804 | |
| 4yry | FAD | Glutamate synthase, beta subunit | / | 0.801 | |
| 3m0o | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.798 | |
| 2rab | FAD | Glutathione amide reductase | / | 0.797 | |
| 4fwf | FAD | Lysine-specific histone demethylase 1B | 1 | 0.797 | |
| 3b6d | FAE | Cholesterol oxidase | 1.1.3.6 | 0.796 | |
| 1n4v | FAD | Cholesterol oxidase | 1.1.3.6 | 0.793 | |
| 3lzw | FAD | Ferredoxin--NADP reductase 2 | 1.18.1.2 | 0.790 | |
| 1mxt | FAE | Cholesterol oxidase | 1.1.3.6 | 0.789 | |
| 4emw | FAD | Coenzyme A disulfide reductase | / | 0.783 | |
| 2dw4 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.781 | |
| 2f5z | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.781 | |
| 1n4w | FAD | Cholesterol oxidase | 1.1.3.6 | 0.777 | |
| 4cnj | FAD | L-amino acid oxidase | / | 0.776 | |
| 1rp0 | AHZ | Thiamine thiazole synthase, chloroplastic | / | 0.775 | |
| 1geu | FAD | Glutathione reductase | 1.8.1.7 | 0.774 | |
| 3axb | FAD | Putative oxidoreductase | / | 0.773 | |
| 5fs7 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.773 | |
| 2eq6 | FAD | Dihydrolipoyl dehydrogenase | / | 0.772 | |
| 3fpz | AHZ | Thiamine thiazole synthase | / | 0.770 | |
| 1cjc | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.768 | |
| 2w0h | FAD | Trypanothione reductase | / | 0.767 | |
| 2yls | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.767 | |
| 1e1k | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.764 | |
| 2qcu | FAD | Aerobic glycerol-3-phosphate dehydrogenase | 1.1.5.3 | 0.763 | |
| 4u2l | SFD | Cholesterol oxidase | 1.1.3.6 | 0.763 | |
| 3icr | FAD | Coenzyme A disulfide reductase | / | 0.762 | |
| 2i0z | FAD | NAD(FAD)-utilizing dehydrogenases | / | 0.761 | |
| 4xwz | FAD | Fructosyl amine:oxygen oxidoreductase | / | 0.760 | |
| 1lqu | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.757 | |
| 3cnt | FAD | Polyamine oxidase FMS1 | / | 0.757 | |
| 5ez7 | FAD | Probable FAD-dependent oxidoreductase PA4991 | / | 0.757 | |
| 2hko | FAD | Lysine-specific histone demethylase 1A | 1 | 0.756 | |
| 3ict | FAD | Coenzyme A disulfide reductase | / | 0.755 | |
| 3kpf | FAD | Polyamine oxidase | 1.5.3.14 | 0.755 | |
| 4opc | FDA | Conserved Archaeal protein | / | 0.755 | |
| 1h81 | FAD | Polyamine oxidase | 1.5.3.14 | 0.754 | |
| 3ics | FAD | Coenzyme A disulfide reductase | / | 0.754 | |
| 3lzx | FAD | Ferredoxin--NADP reductase 2 | 1.18.1.2 | 0.754 | |
| 1dnc | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.753 | |
| 3cgd | FAD | Coenzyme A disulfide reductase | / | 0.752 | |
| 4d03 | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.749 | |
| 3oz2 | FAD | Digeranylgeranylglycerophospholipid reductase | / | 0.748 | |
| 3pl8 | FAD | Pyranose 2-oxidase | / | 0.748 | |
| 4gcm | FAD | Thioredoxin reductase | 1.8.1.9 | 0.748 | |
| 2gqf | FAD | Uncharacterized protein HI_0933 | / | 0.747 | |
| 2ylr | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.745 | |
| 2c3c | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.743 | |
| 1ryi | FAD | Glycine oxidase | 1.4.3.19 | 0.742 | |
| 2bab | FAD | Putative aminooxidase | / | 0.742 | |
| 3rha | FDA | Putrescine oxidase | / | 0.742 | |
| 3ef6 | FAD | Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component | 1.18.1.3 | 0.741 | |
| 3ish | FAD | Thioredoxin reductase | 1.8.1.9 | 0.741 | |
| 3ab1 | FAD | Ferredoxin--NADP reductase | 1.18.1.2 | 0.740 | |
| 3ic9 | FAD | Putative dihydrolipoamide dehydrogenase | / | 0.739 | |
| 3jsk | AHZ | Thiamine thiazole synthase | / | 0.739 | |
| 4d04 | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.738 | |
| 2yg4 | FAD | Putrescine oxidase | / | 0.736 | |
| 1e1l | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.735 | |
| 2cvj | FAD | Thioredoxin reductase related protein | / | 0.735 | |
| 2x3n | FAD | Probable FAD-dependent monooxygenase | / | 0.735 | |
| 3gwd | FAD | Cyclohexanone monooxygenase | / | 0.735 | |
| 3atr | FDA | Conserved Archaeal protein | / | 0.734 | |
| 3kve | FAD | L-amino-acid oxidase | / | 0.734 | |
| 4i58 | FAD | Cyclohexylamine Oxidase | / | 0.734 | |
| 2jae | FAD | L-amino acid oxidase | / | 0.733 | |
| 1e1m | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.732 | |
| 1gth | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.732 | |
| 3k7m | FAD | 6-hydroxy-L-nicotine oxidase | / | 0.730 | |
| 2c7g | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.729 | |
| 4mok | FAD | Pyranose 2-oxidase | / | 0.729 | |
| 4u8j | FDA | UDP-galactopyranose mutase | / | 0.729 | |
| 4gut | FAD | Lysine-specific histone demethylase 1B | 1 | 0.728 | |
| 4ysh | FAD | Glycine oxidase | / | 0.728 | |
| 3cnd | FAD | Polyamine oxidase FMS1 | / | 0.727 | |
| 3uth | FDA | UDP-galactopyranose mutase | / | 0.727 | |
| 2b9y | FAD | Putative aminooxidase | / | 0.725 | |
| 4wct | FAD | Fructosyl amine:oxygen oxidoreductase | / | 0.725 | |
| 1yy5 | FAD | Polyamine oxidase FMS1 | / | 0.724 | |
| 2rgh | FAD | Alpha-Glycerophosphate Oxidase | / | 0.724 | |
| 3he3 | FAD | UDP-galactopyranose mutase | / | 0.724 | |
| 4bv6 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.724 | |
| 1h7w | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.723 | |
| 2yg6 | FAD | Putrescine oxidase | / | 0.723 | |
| 3atq | FDA | Conserved Archaeal protein | / | 0.723 | |
| 4dsg | FAD | Uncharacterized protein | / | 0.723 | |
| 4eqr | FAD | Coenzyme A disulfide reductase | / | 0.723 | |
| 1gte | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.722 | |
| 2yg7 | FAD | Putrescine oxidase | / | 0.722 | |
| 4u8p | FDA | UDP-galactopyranose mutase | / | 0.722 | |
| 1ng4 | FAD | Glycine oxidase | 1.4.3.19 | 0.721 | |
| 1rsg | FAD | Polyamine oxidase FMS1 | / | 0.720 | |
| 2q7v | FAD | Thioredoxin reductase | / | 0.720 | |
| 3oc4 | FAD | Oxidoreductase, pyridine nucleotide-disulfide family | / | 0.720 | |
| 4opi | FDA | Conserved Archaeal protein | / | 0.720 | |
| 2jb1 | FAD | L-amino acid oxidase | / | 0.719 | |
| 3kpk | FAD | Sulfide-quinone reductase | / | 0.719 | |
| 4c3x | FAD | 3-ketosteroid dehydrogenase | / | 0.719 | |
| 2ba9 | FAD | Putative aminooxidase | / | 0.718 | |
| 2cfy | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.718 | |
| 1kif | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.717 | |
| 3fg2 | FAD | Putative rubredoxin reductase | / | 0.717 | |
| 3k30 | ADP | Histamine dehydrogenase | / | 0.717 | |
| 1e6e | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.715 | |
| 3rnm | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.715 | |
| 4nzh | FAD | L-ornithine N(5)-monooxygenase | / | 0.715 | |
| 2gqw | FAD | Ferredoxin reductase | / | 0.714 | |
| 3bi2 | FAD | Polyamine oxidase FMS1 | / | 0.714 | |
| 4emj | FAD | Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component | 1.18.1.3 | 0.714 | |
| 5br7 | FAD | UDP-galactopyranose mutase | / | 0.714 | |
| 1xpq | FAD | Polyamine oxidase FMS1 | / | 0.713 | |
| 2ylt | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.713 | |
| 4j56 | FAD | Thioredoxin reductase 2 | 1.8.1.9 | 0.713 | |
| 1h83 | FAD | Polyamine oxidase | 1.5.3.14 | 0.712 | |
| 2ylz | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.711 | |
| 4lii | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.711 | |
| 5fs9 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.710 | |
| 1gsn | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.708 | |
| 2yr5 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.708 | |
| 1e1n | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.707 | |
| 2yg3 | FAD | Putrescine oxidase | / | 0.707 | |
| 3sm8 | FNK | FAD-dependent catabolic D-arginine dehydrogenase DauA | / | 0.707 | |
| 4hsu | FAD | Lysine-specific histone demethylase 1B | 1 | 0.707 | |
| 2ign | FAD | Pyranose 2-oxidase | / | 0.706 | |
| 2jb2 | FAD | L-amino acid oxidase | / | 0.706 | |
| 2q0l | FAD | Thioredoxin reductase | 1.8.1.9 | 0.706 | |
| 3djg | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.706 | |
| 3nta | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.706 | |
| 3bg7 | FAD | Pyranose 2-oxidase | / | 0.705 | |
| 1ng3 | FAD | Glycine oxidase | 1.4.3.19 | 0.704 | |
| 2gr3 | FAD | Ferredoxin reductase | / | 0.704 | |
| 2iw5 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.704 | |
| 3uoy | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.704 | |
| 4fx9 | FAD | Coenzyme A disulfide reductase | 1.8.1.14 | 0.704 | |
| 4opt | FDA | Conserved Archaeal protein | / | 0.704 | |
| 5c2t | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.704 | |
| 3kkj | FAD | Renalase | / | 0.703 | |
| 4guu | FA9 | Lysine-specific histone demethylase 1B | 1 | 0.703 | |
| 2igo | FAD | Pyranose 2-oxidase | / | 0.702 | |
| 3cgc | FAD | Coenzyme A disulfide reductase | / | 0.702 | |
| 4mo2 | FAD | UDP-galactopyranose mutase | / | 0.702 | |
| 1tyt | FAD | Trypanothione reductase | 1.8.1.12 | 0.701 | |
| 2eq9 | FAD | Dihydrolipoyl dehydrogenase | / | 0.701 | |
| 3k4c | FAD | Pyranose 2-oxidase | / | 0.701 | |
| 2q0k | FAD | Thioredoxin reductase | 1.8.1.9 | 0.700 | |
| 3gwf | FAD | Cyclohexanone monooxygenase | / | 0.700 | |
| 4tm4 | FDA | KtzI | / | 0.700 | |
| 2b9x | FAD | Putative aminooxidase | / | 0.699 | |
| 2y48 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.699 | |
| 3jqr | FAD | Ferredoxin--NADP reductase, apicoplast | / | 0.699 | |
| 4eqs | FAD | Coenzyme A disulfide reductase | / | 0.699 | |
| 4rpg | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.699 | |
| 2b9w | FAD | Putative aminooxidase | / | 0.698 | |
| 3nt6 | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.697 | |
| 4h4p | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.697 | |
| 4h4v | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.697 | |
| 4h4x | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.697 | |
| 4nwz | FAD | FAD-dependent pyridine nucleotide-disulfide oxidoreductase | / | 0.697 | |
| 4opg | FDA | Conserved Archaeal protein | / | 0.697 | |
| 1joa | FAD | NADH peroxidase | 1.11.1.1 | 0.696 | |
| 2c3d | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.696 | |
| 2yr4 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.696 | |
| 4dsh | FDA | Uncharacterized protein | / | 0.696 | |
| 5l3d | FAD | Lysine-specific histone demethylase 1A | 1 | 0.696 | |
| 3syi | FAD | Sulfide-quinone reductase | / | 0.695 | |
| 3ukf | FDA | UDP-galactopyranose mutase | / | 0.695 | |
| 1fl2 | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.694 | |
| 1n9l | FMN | Putative blue light receptor | / | 0.694 | |
| 1tdo | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.694 | |
| 3cn8 | FAD | Polyamine oxidase FMS1 | / | 0.694 | |
| 3gsi | FAD | Dimethylglycine oxidase | 1.5.3.10 | 0.694 | |
| 5j60 | FAD | Thioredoxin reductase | / | 0.694 | |
| 5hxw | FAD | L-amino acid deaminase | / | 0.693 | |
| 2jk6 | FAD | Trypanothione reductase | / | 0.692 | |
| 3cuk | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.692 | |
| 3ad9 | FAD | Subunit beta of sarcosine oxidase | / | 0.691 | |
| 3ntd | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.691 | |
| 4fwe | FAD | Lysine-specific histone demethylase 1B | 1 | 0.691 | |
| 3k7t | FAD | 6-hydroxy-L-nicotine oxidase | / | 0.690 | |
| 3ute | FAD | UDP-galactopyranose mutase | / | 0.690 | |
| 4o5u | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.690 | |
| 5c3j | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.690 | |
| 1y56 | FAD | 382aa long hypothetical sarcosine oxidase | / | 0.686 | |
| 2a8x | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.686 | |
| 2dvl | FAD | Acyl-CoA dehydrogenase | / | 0.686 | |
| 3mpi | FAD | Glutaryl-CoA dehydrogenase | 1.3.99.32 | 0.686 | |
| 3nyc | FAD | FAD-dependent catabolic D-arginine dehydrogenase DauA | / | 0.686 | |
| 2cul | FAD | GidA-related protein | / | 0.685 | |
| 3k4n | FAD | Pyranose 2-oxidase | / | 0.685 | |
| 4ap3 | FAD | Steroid monooxygenase | / | 0.685 | |
| 2xlp | FAD | Putative flavin-containing monooxygenase | / | 0.684 | |
| 3up5 | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.684 | |
| 4u8l | FDA | UDP-galactopyranose mutase | / | 0.684 | |
| 1i8t | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.683 | |
| 1zmc | NAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.683 | |
| 3qfb | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.683 | |
| 4up3 | FAD | Thioredoxin reductase | / | 0.683 | |
| 1kf6 | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.682 | |
| 2whd | FAD | Thioredoxin reductase | / | 0.682 | |
| 3mj4 | FAD | UDP-galactopyranose mutase | / | 0.682 | |
| 3pvc | FAD | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | / | 0.682 | |
| 4ntc | FAD | Thioredoxin reductase gliT | / | 0.682 | |
| 4x4j | FAD | Putative oxygenase | / | 0.682 | |
| 2nvk | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.681 | |
| 3r9u | FAD | Thioredoxin reductase | / | 0.681 | |
| 4cnk | FAD | L-amino acid oxidase | / | 0.680 | |
| 4fwj | FAD | Lysine-specific histone demethylase 1B | 1 | 0.680 | |
| 4yjd | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.680 | |
| 1tdn | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.679 | |
| 2ywl | FAD | Thioredoxin reductase related protein | / | 0.679 | |
| 3utf | FDA | UDP-galactopyranose mutase | / | 0.679 | |
| 4hb9 | FAD | Uncharacterized protein | / | 0.679 | |
| 4yac | NAI | C alpha-dehydrogenase | / | 0.679 | |
| 1djq | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.678 | |
| 1f8w | FAD | NADH peroxidase | 1.11.1.1 | 0.678 | |
| 1y56 | ATP | Uncharacterized protein | / | 0.678 | |
| 1zx9 | FAD | Mercuric reductase | 1.16.1.1 | 0.678 | |
| 2tmd | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.678 | |
| 5dbj | FAD | FADH2-dependent halogenase PltA | / | 0.678 | |
| 1grh | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.677 | |
| 1o94 | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.677 | |
| 1w4x | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.677 | |
| 1zmc | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.677 | |
| 3rp8 | FAD | FAD-dependent urate hydroxylase | / | 0.677 | |
| 4b68 | FAD | L-ornithine N(5)-monooxygenase | / | 0.677 | |
| 4gdp | FAD | Polyamine oxidase FMS1 | / | 0.677 | |
| 4gur | FAD | Lysine-specific histone demethylase 1B | 1 | 0.677 | |
| 4rph | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.677 | |
| 4u8k | FDA | UDP-galactopyranose mutase | / | 0.677 | |
| 2xdo | FAD | TetX family tetracycline inactivation enzyme | / | 0.676 | |
| 2xls | FAD | Putative flavin-containing monooxygenase | / | 0.676 | |
| 3urh | FAD | Dihydrolipoyl dehydrogenase | / | 0.676 | |
| 4b1b | FAD | Thioredoxin reductase | 1.8.1.9 | 0.676 | |
| 4eeu | FMN | Phototropin-2 | 2.7.11.1 | 0.676 | |
| 4tlx | FDA | KtzI | / | 0.676 | |
| 5dxj | SFG | Histone-arginine methyltransferase CARM1 | / | 0.676 | |
| 2pdt | FAD | Vivid PAS protein VVD | / | 0.675 | |
| 3we0 | FAD | Lysine 2-monooxygenase | / | 0.675 | |
| 1reo | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.674 | |
| 4gus | FAD | Lysine-specific histone demethylase 1B | 1 | 0.674 | |
| 4j33 | FAD | Kynurenine 3-monooxygenase | / | 0.674 | |
| 4jdr | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.674 | |
| 4mih | FAD | Pyranose 2-oxidase | 1.1.3.10 | 0.674 | |
| 4mo2 | FDA | UDP-galactopyranose mutase | / | 0.674 | |
| 1trb | FAD | Thioredoxin reductase | 1.8.1.9 | 0.673 | |
| 4ccq | FAD | Thioredoxin reductase | / | 0.673 | |
| 5g3s | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.673 | |
| 1n9n | FMN | Putative blue light receptor | / | 0.672 | |
| 1qo8 | FAD | Fumarate reductase flavoprotein subunit | / | 0.672 | |
| 3f8d | FAD | NADH oxidase/thioredoxin reductase | / | 0.672 | |
| 3hjk | FAD | Vivid PAS protein VVD | / | 0.672 | |
| 3sfd | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.672 | |
| 3sfe | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.672 | |
| 4nm9 | FAD | Bifunctional protein PutA | / | 0.672 | |
| 4yus | FMN | Family 3 adenylate cyclase | / | 0.672 | |
| 2du8 | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.671 | |
| 2e1m | FAD | L-glutamate oxidase | / | 0.671 | |
| 2pd8 | FAD | Vivid PAS protein VVD | / | 0.671 | |
| 3ukk | FAD | UDP-galactopyranose mutase | / | 0.671 | |
| 4h2n | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.671 | |
| 4o5q | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.671 | |
| 1djn | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.670 | |
| 2yvf | FAD | Ferredoxin reductase | / | 0.670 | |
| 4at0 | FAD | Possible succinate dehydrogenase | / | 0.670 | |
| 4nmb | FAD | Bifunctional protein PutA | / | 0.670 | |
| 4wx1 | FDA | UDP-galactopyranose mutase | / | 0.670 | |
| 4ytn | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.670 | |
| 5er0 | FAD | Uncharacterized NAD(FAD)-dependent dehydrogenase | / | 0.670 | |
| 2yg5 | FAD | Putrescine oxidase | / | 0.669 | |
| 3sgl | FAD | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | / | 0.669 | |
| 4eer | FMN | Phototropin-2 | 2.7.11.1 | 0.669 | |
| 1sez | FAD | Protoporphyrinogen oxidase, mitochondrial | 1.3.3.4 | 0.668 | |
| 2dki | FAD | 3-hydroxybenzoate 4-monooxygenase | 1.14.13.23 | 0.668 | |
| 3d72 | FAD | Vivid PAS protein VVD | / | 0.668 | |
| 3lsi | FAD | Pyranose 2-oxidase | / | 0.668 | |
| 4ees | FMN | Phototropin-2 | 2.7.11.1 | 0.668 | |
| 4xbf | FAD | Lysine-specific histone demethylase 1A | 1 | 0.668 | |
| 1lm1 | FMN | Ferredoxin-dependent glutamate synthase 2 | 1.4.7.1 | 0.667 | |
| 3bi5 | FAD | Polyamine oxidase FMS1 | / | 0.667 | |
| 4u8o | FDA | UDP-galactopyranose mutase | / | 0.667 | |
| 1nhp | FAD | NADH peroxidase | 1.11.1.1 | 0.666 | |
| 2cdu | ADP | NADH oxidase | / | 0.666 | |
| 2ok7 | FAD | Ferredoxin--NADP reductase, apicoplast | / | 0.666 | |
| 4qof | FMN | Ribosyldihydronicotinamide dehydrogenase [quinone] | / | 0.666 | |
| 4bk2 | FAD | Probable salicylate monooxygenase | / | 0.665 | |
| 4u8n | FDA | UDP-galactopyranose mutase | / | 0.665 | |
| 1d7y | FAD | Ferredoxin reductase | / | 0.664 | |
| 2z6d | FMN | Phototropin-2 | 2.7.11.1 | 0.664 | |
| 3cgb | FAD | Coenzyme A disulfide reductase | / | 0.664 | |
| 4aos | FAD | Steroid monooxygenase | / | 0.663 | |
| 4h4t | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.663 | |
| 1ewy | FAD | Ferredoxin--NADP reductase | 1.18.1.2 | 0.662 | |
| 1knr | FAD | L-aspartate oxidase | 1.4.3.16 | 0.662 | |
| 1m6i | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.662 | |
| 1tdk | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.662 | |
| 2du2 | FMN | Lactate oxidase | / | 0.662 | |
| 2wes | FAD | Tryptophan 5-halogenase | / | 0.662 | |
| 2xlr | FAD | Putative flavin-containing monooxygenase | / | 0.662 | |
| 3t14 | FAD | Sulfide-quinone reductase | / | 0.662 | |
| 4ocg | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.662 | |
| 1gaq | FAD | Ferredoxin | / | 0.661 | |
| 1grg | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.661 | |
| 2ok8 | FAD | Ferredoxin--NADP reductase, apicoplast | / | 0.661 | |
| 3fbs | FAD | Oxidoreductase | / | 0.661 | |
| 4kx6 | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.661 | |
| 5dx8 | SFG | Histone-arginine methyltransferase CARM1 | / | 0.661 | |
| 5fs6 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.661 | |
| 2bn4 | FAD | NADPH--cytochrome P450 reductase | / | 0.660 | |
| 3cge | FAD | Coenzyme A disulfide reductase | / | 0.660 | |
| 3hji | FAD | Vivid PAS protein VVD | / | 0.660 | |
| 4hia | FMN | LOV protein | / | 0.660 | |
| 4zvl | FAD | Ribosyldihydronicotinamide dehydrogenase [quinone] | / | 0.660 | |
| 1fec | FAD | Trypanothione reductase | 1.8.1.12 | 0.659 | |
| 1owm | FAD | Deoxyribodipyrimidine photo-lyase | 4.1.99.3 | 0.659 | |
| 3hdy | FDA | UDP-galactopyranose mutase | / | 0.659 | |
| 5dju | FMN | NPH1-2 | / | 0.659 | |
| 2bac | FAD | Putative aminooxidase | / | 0.658 | |
| 2ji9 | ADP | Oxalyl-CoA decarboxylase | 4.1.1.8 | 0.658 | |
| 2vqb | FAD | Putative flavin-containing monooxygenase | / | 0.658 | |
| 3dgh | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.658 | |
| 4eqx | FAD | Coenzyme A disulfide reductase | / | 0.658 | |
| 4rsl | FAD | Fructosyl peptide oxidase | / | 0.658 | |
| 5a89 | FMN | Riboflavin biosynthesis protein RibF | 2.7.1.26 | 0.658 | |
| 1r2j | FAD | FkbI | / | 0.657 | |
| 2eq7 | FAD | Dihydrolipoyl dehydrogenase | / | 0.657 | |
| 3lov | FAD | Protoporphyrinogen oxidase | / | 0.657 | |
| 5cho | FAD | Flavin reductase | / | 0.657 | |
| 1jr8 | FAD | FAD-linked sulfhydryl oxidase ERV2 | 1.8.3.2 | 0.656 | |
| 3up4 | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.656 | |
| 4rpj | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.656 | |
| 2gr0 | FAD | Ferredoxin reductase | / | 0.655 | |
| 2rgo | FAD | Alpha-Glycerophosphate Oxidase | / | 0.655 | |
| 2xvi | FAD | Putative flavin-containing monooxygenase | / | 0.655 | |
| 3dk8 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.655 | |
| 3is2 | FAD | Vivid PAS protein VVD | / | 0.655 | |
| 3m13 | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.655 | |
| 4cy8 | FDA | 2-hydroxybiphenyl-3-monooxygenase | / | 0.655 | |
| 1get | FAD | Glutathione reductase | 1.8.1.7 | 0.654 | |
| 3bm1 | FMN | Putative NAD(P)H nitroreductase YdjA | / | 0.654 | |
| 3i99 | FAD | UDP-N-acetylenolpyruvoylglucosamine reductase | / | 0.654 | |
| 3ka7 | FAD | Putative oxidoreductase | / | 0.654 | |
| 3l8k | ADP | Dihydrolipoamide dehydrogenase (PdhD-3) | / | 0.654 | |
| 4b65 | FAD | L-ornithine N(5)-monooxygenase | / | 0.653 | |
| 4h4u | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.653 | |
| 1iqr | FAD | Deoxyribodipyrimidine photo-lyase | 4.1.99.3 | 0.652 | |
| 1j5p | NAD | L-aspartate dehydrogenase | 1.4.1.21 | 0.652 | |
| 1k0j | FAD | p-hydroxybenzoate hydroxylase | / | 0.652 | |
| 2bi8 | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.652 | |
| 4ykg | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.652 | |
| 2gmh | FAD | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial | 1.5.5.1 | 0.651 | |
| 2vou | FAD | 2,6-dihydroxypyridine 3-monooxygenase | 1.14.13.10 | 0.651 | |
| 4ech | FAD | Polyamine oxidase FMS1 | / | 0.651 | |
| 4ykf | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.651 | |
| 1ps9 | FAD | 2,4-dienoyl-CoA reductase | 1.3.1.34 | 0.650 | |
| 2qae | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.650 | |
| 2r0c | FAD | Putative FAD-monooxygenase | / | 0.650 | |
| 3uov | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.650 | |
| 4jnq | FDA | Thioredoxin reductase | / | 0.650 | |
| 4opl | FDA | Conserved Archaeal protein | / | 0.650 | |
| 4utk | FNR | Xenobiotic reductase | / | 0.650 |