sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 4qxa | GTP | Ras-related protein Rab-9A |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 4qxa | GTP | Ras-related protein Rab-9A | / | 1.229 | |
| 1g17 | GNP | Ras-related protein SEC4 | / | 1.077 | |
| 4kvg | GTP | Ras-related protein Rap-1A | / | 1.072 | |
| 1n6l | GTP | Ras-related protein Rab-5A | / | 1.070 | |
| 1yzq | GNP | Ras-related protein Rab-6A | / | 1.069 | |
| 2c5l | GTP | GTPase HRas | / | 1.069 | |
| 2gil | GTP | Ras-related protein Rab-6A | / | 1.063 | |
| 3mjh | GTP | Ras-related protein Rab-5A | / | 1.059 | |
| 3i3s | GNP | GTPase HRas | / | 1.058 | |
| 1vg8 | GNP | Ras-related protein Rab-7a | / | 1.056 | |
| 4g0n | GNP | GTPase HRas | / | 1.050 | |
| 3e5h | GNP | Ras-related protein Rab-28 | / | 1.041 | |
| 3tso | GNP | Ras-related protein Rab-25 | / | 1.038 | |
| 4dso | GSP | GTPase KRas | / | 1.035 | |
| 4rkf | GNP | Ras-related protein Rab-3 | / | 1.035 | |
| 3bc1 | GNP | Ras-related protein Rab-27A | / | 1.032 | |
| 3oiw | GNP | GTPase HRas | / | 1.031 | |
| 3oiu | GNP | GTPase HRas | / | 1.030 | |
| 2xtz | GSP | Guanine nucleotide-binding protein alpha-1 subunit | / | 1.029 | |
| 3rs4 | GNP | GTPase HRas | / | 1.029 | |
| 3lbn | GNP | GTPase HRas | / | 1.028 | |
| 4dlv | GNP | GTPase HRas | / | 1.028 | |
| 4dlx | GNP | GTPase HRas | / | 1.026 | |
| 2ffq | GSP | Ras-related protein Rab-6B | / | 1.024 | |
| 3k8y | GNP | GTPase HRas | / | 1.019 | |
| 3rsl | GNP | GTPase HRas | / | 1.019 | |
| 3v4f | GNP | GTPase HRas | / | 1.019 | |
| 3lbh | GNP | GTPase HRas | / | 1.018 | |
| 4l9w | GNP | GTPase HRas | / | 1.018 | |
| 2fe4 | GDP | Ras-related protein Rab-6B | / | 1.017 | |
| 3lbi | GNP | GTPase HRas | / | 1.017 | |
| 3rs7 | GNP | GTPase HRas | / | 1.016 | |
| 4dlt | GNP | GTPase HRas | / | 1.015 | |
| 4hdo | GNP | Ras-related protein Rap-1b | / | 1.015 | |
| 4nyi | GNP | GTPase HRas | / | 1.015 | |
| 4cym | GCP | Ras-related protein Rab-32 | / | 1.010 | |
| 3sbd | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 1.009 | |
| 4dlz | GNP | GTPase HRas | / | 1.009 | |
| 4k81 | GTP | GTPase HRas | / | 1.009 | |
| 2rge | GNP | GTPase HRas | / | 1.005 | |
| 3x1z | GNP | Ras-related protein Rap-1b | / | 1.002 | |
| 4dls | GNP | GTPase HRas | / | 1.002 | |
| 3pit | GNP | Ras-related protein M-Ras | / | 1.000 | |
| 4nyj | GNP | GTPase HRas | / | 1.000 | |
| 3rs5 | GNP | GTPase HRas | / | 0.999 | |
| 4xoi | GTP | Transforming protein RhoA | / | 0.998 | |
| 3l8y | GNP | GTPase HRas | / | 0.997 | |
| 1gwn | GTP | Rho-related GTP-binding protein RhoE | / | 0.994 | |
| 3tnf | GNP | Ras-related protein Rab-8A | / | 0.994 | |
| 4dlw | GNP | GTPase HRas | / | 0.993 | |
| 3rs0 | GNP | GTPase HRas | / | 0.991 | |
| 3oiv | GNP | GTPase HRas | / | 0.990 | |
| 1t91 | GTP | Ras-related protein Rab-7a | / | 0.988 | |
| 3rab | GNP | Ras-related protein Rab-3A | / | 0.988 | |
| 3ddc | GNP | GTPase HRas | / | 0.986 | |
| 3tkl | GTP | Ras-related protein Rab-1A | / | 0.986 | |
| 3kko | GNP | Ras-related protein M-Ras | / | 0.985 | |
| 4pao | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.982 | |
| 1zc4 | GNP | Ras-related protein Ral-A | / | 0.981 | |
| 1zc3 | GNP | Ras-related protein Ral-A | / | 0.980 | |
| 1e96 | GTP | Ras-related C3 botulinum toxin substrate 1 | / | 0.979 | |
| 2rgb | GNP | GTPase HRas | / | 0.976 | |
| 2rgc | GNP | GTPase HRas | / | 0.976 | |
| 2rgg | GNP | GTPase HRas | / | 0.976 | |
| 4epx | GDP | GTPase KRas | / | 0.975 | |
| 3law | GNP | Ras-related protein Rab-7a | / | 0.974 | |
| 2fg5 | GNP | Ras-related protein Rab-31 | / | 0.973 | |
| 5b2z | GNP | GTPase HRas | / | 0.973 | |
| 2gcp | GSP | Rho-related GTP-binding protein RhoC | / | 0.971 | |
| 4uj3 | GNP | Ras-related protein Rab-11A | / | 0.969 | |
| 1cxz | GSP | Transforming protein RhoA | / | 0.968 | |
| 3k9l | GNP | GTPase HRas | / | 0.966 | |
| 1ky2 | GNP | GTP-binding protein YPT7 | / | 0.965 | |
| 2bme | GNP | Ras-related protein Rab-4A | / | 0.965 | |
| 3tgp | GNP | GTPase HRas | / | 0.965 | |
| 4js0 | GNP | Cell division control protein 42 homolog | / | 0.964 | |
| 4q03 | GDP | GTPase KRas | / | 0.960 | |
| 4ql3 | GDP | GTPase KRas | / | 0.957 | |
| 4o2l | GTP | GTP-binding protein Rheb | / | 0.955 | |
| 1yu9 | GNP | Ras-related protein Rab-4A | / | 0.953 | |
| 2cl6 | CAG | GTPase HRas | / | 0.953 | |
| 4xvr | GNP | GTPase HRas | / | 0.951 | |
| 3qbt | GNP | Ras-related protein Rab-8A | / | 0.950 | |
| 4dsu | GDP | GTPase KRas | / | 0.950 | |
| 4lhw | GNP | Ras-related protein Rab-8A | / | 0.948 | |
| 1d5c | GDP | GTPase (Rab6) | / | 0.947 | |
| 1mh1 | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.947 | |
| 1z0d | GDP | Ras-related protein Rab-5C | / | 0.947 | |
| 4epw | GDP | GTPase KRas | / | 0.947 | |
| 4dsn | GCP | GTPase KRas | / | 0.946 | |
| 4q02 | GDP | GTPase KRas | / | 0.945 | |
| 1tu3 | GNP | Ras-related protein Rab-5A | / | 0.944 | |
| 3cx8 | GSP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.943 | |
| 4xvq | GNP | GTPase HRas | / | 0.943 | |
| 3oes | GNP | GTPase RhebL1 | / | 0.942 | |
| 3kud | GDP | GTPase HRas | / | 0.941 | |
| 4tq9 | GDP | GTPase KRas | / | 0.941 | |
| 4lhv | GDP | Ras-related protein Rab-8A | / | 0.939 | |
| 1kmq | GNP | Transforming protein RhoA | / | 0.937 | |
| 3kuc | GDP | Ras-related protein Rap-1A | / | 0.937 | |
| 3kkq | GDP | Ras-related protein M-Ras | / | 0.934 | |
| 4l8g | GDP | GTPase KRas | / | 0.934 | |
| 2ce2 | GDP | GTPase HRas | / | 0.931 | |
| 3x1w | GDP | Ras-related protein Rap-1b | / | 0.931 | |
| 4dxa | GSP | Ras-related protein Rap-1b | / | 0.930 | |
| 4l9s | GDP | GTPase HRas | / | 0.930 | |
| 4lv6 | GDP | GTPase KRas | / | 0.929 | |
| 5di3 | GNP | ADP-ribosylation factor-like protein 3 | / | 0.929 | |
| 1cul | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.928 | |
| 1oix | GDP | Ras-related protein Rab-11A | / | 0.928 | |
| 4wa7 | GDP | GTPase KRas | / | 0.928 | |
| 1gia | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.927 | |
| 4dvg | GSP | Rho family GTPase | / | 0.927 | |
| 1lfd | GNP | GTPase HRas | / | 0.923 | |
| 4gzl | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.922 | |
| 1m7b | GTP | Rho-related GTP-binding protein RhoE | / | 0.921 | |
| 4hdq | GNP | Ras-related protein Rap-1b | / | 0.918 | |
| 5dif | GNP | GTP-binding nuclear protein Ran | / | 0.918 | |
| 4d0l | GSP | Ras-related protein Rab-11A | / | 0.917 | |
| 4xsg | GSP | Transforming protein RhoA | / | 0.917 | |
| 1gil | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.910 | |
| 3dt2 | GTP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.909 | |
| 4o2r | GDP | GTP-binding protein Rheb | / | 0.907 | |
| 1z2c | GNP | Rho-related GTP-binding protein RhoC | / | 0.904 | |
| 3a58 | GNP | GTP-binding protein RHO1 | / | 0.903 | |
| 1cs4 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.900 | |
| 1wa5 | GTP | GTP-binding nuclear protein Ran | / | 0.900 | |
| 1a2b | GSP | Transforming protein RhoA | / | 0.899 | |
| 1uad | GNP | Ras-related protein Ral-A | / | 0.899 | |
| 1s1c | GNP | Transforming protein RhoA | / | 0.898 | |
| 3r9x | GNP | GTPase Era | / | 0.896 | |
| 3th5 | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.896 | |
| 4mit | GTP | Rho-related protein racC | / | 0.894 | |
| 1ow3 | GDP | Transforming protein RhoA | / | 0.892 | |
| 2p2l | GDP | Ras-related C3 botulinum toxin substrate 1 | / | 0.891 | |
| 2q3f | GNP | Ras-related GTP-binding protein D | / | 0.891 | |
| 2qme | GCP | Ras-related C3 botulinum toxin substrate 3 | / | 0.890 | |
| 3sbe | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.887 | |
| 3dt4 | GTP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.886 | |
| 5jlj | GNP | GTP-binding nuclear protein Ran | / | 0.886 | |
| 1z0f | GDP | Ras-related protein Rab-14 | / | 0.884 | |
| 3b1x | GNP | Ferrous iron transport protein B | / | 0.884 | |
| 2ic5 | GNP | Ras-related C3 botulinum toxin substrate 3 | / | 0.881 | |
| 4lpk | GDP | GTPase KRas | / | 0.881 | |
| 3wyg | GTP | GTP-binding nuclear protein GSP1/CNR1 | / | 0.879 | |
| 3cph | GDP | Ras-related protein SEC4 | / | 0.878 | |
| 3vhx | GTP | ADP-ribosylation factor 6 | / | 0.878 | |
| 3w3z | GTP | GTP-binding nuclear protein Ran | / | 0.877 | |
| 2dpx | GDP | GTP-binding protein RAD | / | 0.874 | |
| 1wdt | GTP | Elongation factor G (EF-G-2) | / | 0.873 | |
| 1z2a | GDP | Ras-related protein Rab-23 | / | 0.873 | |
| 4uj5 | GNP | Ras-related protein Rab-11A | / | 0.869 | |
| 1g16 | GDP | Ras-related protein SEC4 | / | 0.868 | |
| 2ov2 | GCP | Ras-related C3 botulinum toxin substrate 3 | / | 0.865 | |
| 2qtv | GNP | Small COPII coat GTPase SAR1 | 3.6.5 | 0.865 | |
| 1ibr | GNP | GTP-binding nuclear protein Ran | / | 0.864 | |
| 4goj | GNP | ADP-ribosylation factor-like protein 3 | / | 0.863 | |
| 3ref | GDP | Rho family GTPase | / | 0.862 | |
| 1x1r | GDP | Ras-related protein M-Ras | / | 0.860 | |
| 1xtr | GNP | GTP-binding protein Rheb | / | 0.860 | |
| 1zbd | GTP | Ras-related protein Rab-3A | / | 0.860 | |
| 4obe | GDP | GTPase KRas | / | 0.860 | |
| 1ytm | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.859 | |
| 4luc | GDP | GTPase KRas | / | 0.856 | |
| 3bbp | GTP | Ras-related protein Rab-6A | / | 0.853 | |
| 3wyf | GTP | GTP-binding nuclear protein | / | 0.852 | |
| 4lrw | GDP | GTPase KRas | / | 0.852 | |
| 5c46 | GSP | Ras-related protein Rab-11A | / | 0.851 | |
| 2olq | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.850 | |
| 1z0a | GDP | Ras-related protein Rab-2A | / | 0.846 | |
| 4itr | GDP | Cell division control protein 42 homolog | / | 0.846 | |
| 3kz1 | GSP | Transforming protein RhoA | / | 0.845 | |
| 2g0n | GDP | Ras-related C3 botulinum toxin substrate 3 | / | 0.844 | |
| 1f5n | GNP | Guanylate-binding protein 1 | / | 0.843 | |
| 2bku | GTP | GTP-binding nuclear protein Ran | / | 0.836 | |
| 2gvd | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.836 | |
| 4jsy | GTP | Metallophosphoesterase | / | 0.836 | |
| 3cx6 | GDP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.833 | |
| 2ic5 | GDP | Ras-related C3 botulinum toxin substrate 3 | / | 0.831 | |
| 5dha | GNP | GTP-binding nuclear protein Ran | / | 0.829 | |
| 3zfd | ANP | Chromosome-associated kinesin KIF4 | / | 0.828 | |
| 2jj2 | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.827 | |
| 2olr | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.826 | |
| 4qm6 | GTP | Metallophosphoesterase | / | 0.822 | |
| 1ayl | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.819 | |
| 1azt | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.819 | |
| 2bc9 | GNP | Guanylate-binding protein 1 | / | 0.819 | |
| 2j5x | GSP | ADP-ribosylation factor 6 | / | 0.819 | |
| 2w2x | GSP | Ras-related C3 botulinum toxin substrate 2 | / | 0.819 | |
| 4tl7 | ATP | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.819 | |
| 2j0v | GDP | Rac-like GTP-binding protein ARAC7 | / | 0.817 | |
| 3fvq | ATP | Fe(3+) ions import ATP-binding protein FbpC | / | 0.817 | |
| 4g01 | GDP | Ras-related protein RABF2b | / | 0.817 | |
| 1rj9 | GCP | Signal recognition particle receptor FtsY | / | 0.814 | |
| 2cls | GTP | Rho-related GTP-binding protein Rho6 | / | 0.813 | |
| 1mmg | AGS | Myosin-2 heavy chain | / | 0.809 | |
| 3eg5 | GNP | Cell division control protein 42 homolog | / | 0.808 | |
| 1yhn | GTP | Ras-related protein Rab-7a | / | 0.807 | |
| 1khb | GCP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.804 | |
| 1fmw | ATP | Myosin-2 heavy chain | / | 0.803 | |
| 5bn3 | ADP | V-type ATP synthase alpha chain | / | 0.803 | |
| 5bn3 | ADP | NEQ263 | / | 0.803 | |
| 4a28 | ADP | Kinesin-like protein KIF11 | / | 0.802 | |
| 1am4 | GNP | Cell division control protein 42 homolog | / | 0.801 | |
| 2hf8 | GSP | Probable hydrogenase nickel incorporation protein HypB | / | 0.800 | |
| 4db1 | ANP | Myosin-7 | / | 0.800 | |
| 1zcb | GDP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.799 | |
| 4y0v | GDP | ADP-ribosylation factor 1, putative | / | 0.797 | |
| 4ylg | GDP | ADP-ribosylation factor 1, putative | / | 0.797 | |
| 1zd9 | GDP | ADP-ribosylation factor-like protein 8A | / | 0.796 | |
| 2uyi | ADP | Kinesin-like protein KIF11 | / | 0.796 | |
| 1bof | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.795 | |
| 4cf7 | ADP | Adenylate kinase | / | 0.792 | |
| 4m0l | GDP | Translation initiation factor 2 subunit gamma | / | 0.792 | |
| 2fna | ADP | Uncharacterized protein | / | 0.791 | |
| 1xts | GTP | GTP-binding protein Rheb | / | 0.790 | |
| 3vx4 | ATP | Putative ABC transporter, ATP-binding protein ComA | / | 0.790 | |
| 1jx2 | ADP | Myosin-2 heavy chain | / | 0.788 | |
| 4pjk | ADP | Myosin-2 heavy chain | / | 0.787 | |
| 2jj2 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.786 | |
| 2jj2 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.786 | |
| 4ncl | GDP | Eukaryotic translation initiation factor 5B | / | 0.786 | |
| 4pfp | ADP | Unconventional myosin-VI | / | 0.786 | |
| 5l3s | GNP | Signal recognition particle receptor FtsY | / | 0.785 | |
| 2fju | GSP | Ras-related C3 botulinum toxin substrate 1 | / | 0.784 | |
| 4ldj | GDP | GTPase KRas | / | 0.784 | |
| 4pjj | ADP | Unconventional myosin-VI | / | 0.784 | |
| 5l3r | GCP | Cell division protein FtsY homolog, chloroplastic | / | 0.784 | |
| 1e79 | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.783 | |
| 1e79 | ATP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.783 | |
| 1got | GDP | Guanine nucleotide-binding protein G(t) subunit alpha-1 | / | 0.783 | |
| 3bb3 | GDP | Translocase of chloroplast 33, chloroplastic | 3.6.5 | 0.783 | |
| 4gp6 | ADP | Metallophosphoesterase | / | 0.782 | |
| 4z54 | GDP | Neuronal-specific septin-3 | / | 0.782 | |
| 4tl6 | ANP | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.781 | |
| 2y65 | ADP | Kinesin heavy chain | / | 0.779 | |
| 5cyo | GDP | Septin-9 | / | 0.779 | |
| 1sdm | ADP | Kinesin heavy chain-like protein | / | 0.777 | |
| 2gm1 | ADP | Kinesin-like protein KIF11 | / | 0.777 | |
| 3tqc | ADP | Pantothenate kinase | / | 0.776 | |
| 3ftq | GNP | Septin-2 | / | 0.775 | |
| 4asu | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.774 | |
| 4ike | ADP | Adenylate kinase | / | 0.773 | |
| 2w2v | GTP | Ras-related C3 botulinum toxin substrate 2 | / | 0.772 | |
| 1q3h | ANP | Cystic fibrosis transmembrane conductance regulator | / | 0.771 | |
| 1yrs | ADP | Kinesin-like protein KIF11 | / | 0.771 | |
| 2zet | GTP | Ras-related protein Rab-27B | / | 0.771 | |
| 3myk | ANP | Myosin-2 heavy chain | / | 0.771 | |
| 4o25 | GTP | GTP-binding protein Rheb | / | 0.771 | |
| 3a4l | ANP | L-seryl-tRNA(Sec) kinase | 2.7.1.164 | 0.770 | |
| 1u0h | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.769 | |
| 4tla | ADP | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.769 | |
| 1gp2 | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.768 | |
| 1k5d | GNP | GTP-binding nuclear protein Ran | / | 0.768 | |
| 2j0s | ANP | Eukaryotic initiation factor 4A-III | 3.6.4.13 | 0.768 | |
| 3c16 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.768 | |
| 3ea5 | GDP | GTP-binding nuclear protein Ran | / | 0.768 | |
| 4ys0 | ADP | Protein translocase subunit SecA | / | 0.768 | |
| 1b7t | ADP | Myosin heavy chain, striated muscle | / | 0.767 | |
| 1l8q | ADP | Chromosomal replication initiator protein DnaA | / | 0.767 | |
| 3r9i | ADP | Septum site-determining protein MinD | / | 0.767 | |
| 2dwp | ACP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 | 2.7.1.105 | 0.766 | |
| 3tjz | GNP | ADP-ribosylation factor 1 | / | 0.765 | |
| 4yqf | GDP | Septin-9 | / | 0.765 | |
| 1w5t | ANP | ORC1-type DNA replication protein 2 | / | 0.764 | |
| 4v02 | ATP | Site-determining protein | / | 0.764 | |
| 1mma | ADP | Myosin-2 heavy chain | / | 0.763 | |
| 3m0e | ATP | Transcriptional regulator (NtrC family) | / | 0.763 | |
| 5aun | ADP | Iron-sulfur cluster carrier protein | / | 0.762 | |
| 1aq2 | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.760 | |
| 1xmv | ADP | Protein RecA | / | 0.760 | |
| 4pan | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.760 | |
| 4tle | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.760 | |
| 2c96 | ATP | Psp operon transcriptional activator | / | 0.759 | |
| 2l0x | GDP | GTP-binding protein Rheb | / | 0.759 | |
| 4pk4 | ADP | Unconventional myosin-VI | / | 0.759 | |
| 4tlb | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.759 | |
| 4tlc | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.759 | |
| 2zts | ADP | Uncharacterized protein | / | 0.758 | |
| 4gzm | GSP | Ras-related C3 botulinum toxin substrate 1 | / | 0.758 | |
| 1a4r | GNH | Cell division control protein 42 homolog | / | 0.757 | |
| 1l2t | ATP | Uncharacterized ABC transporter ATP-binding protein MJ0796 | / | 0.757 | |
| 2v7q | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.757 | |
| 4zca | ADP | Kinesin-like protein KIF11 | / | 0.757 | |
| 2v7q | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.756 | |
| 2v7q | ATP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.756 | |
| 3a6p | GTP | GTP-binding nuclear protein Ran | / | 0.756 | |
| 3l9h | ADP | Kinesin-like protein KIF11 | / | 0.756 | |
| 4b7b | ADP | Kinesin-like protein KIF11 | / | 0.756 | |
| 5hpy | GDP | Transforming protein RhoA | / | 0.755 | |
| 3adc | ANP | L-seryl-tRNA(Sec) kinase | 2.7.1.164 | 0.754 | |
| 3sqw | ANP | ATP-dependent RNA helicase MSS116, mitochondrial | 3.6.4.13 | 0.754 | |
| 4r43 | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.754 | |
| 3tlx | ADP | Adenylate kinase 2 | / | 0.752 | |
| 5ftc | ADP | TPR domain protein | / | 0.752 | |
| 1fp6 | ADP | Nitrogenase iron protein 1 | 1.18.6.1 | 0.751 | |
| 2jj1 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.750 | |
| 2jj1 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.750 | |
| 4a1z | ADP | Kinesin-like protein KIF11 | / | 0.749 | |
| 4xjx | ATP | Type I restriction enzyme EcoR124II R protein | 3.1.21.3 | 0.749 | |
| 1ake | AP5 | Adenylate kinase | / | 0.748 | |
| 1h65 | GDP | Translocase of chloroplast 34 | 3.6.5 | 0.748 | |
| 4ki0 | ANP | Maltose/maltodextrin import ATP-binding protein MalK | / | 0.747 | |
| 3i5x | ANP | ATP-dependent RNA helicase MSS116, mitochondrial | 3.6.4.13 | 0.746 | |
| 1w0k | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.745 | |
| 1w0k | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.745 | |
| 4ihq | ADP | Conserved Archaeal protein | / | 0.745 | |
| 1yra | GDP | GPN-loop GTPase PAB0955 | / | 0.744 | |
| 4oi4 | ATP | mRNA cleavage and polyadenylation factor CLP1 | / | 0.743 | |
| 4tld | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.743 | |
| 2jiz | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.742 | |
| 3nbz | GTP | GTP-binding nuclear protein Ran | / | 0.742 | |
| 3zia | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.742 | |
| 1xms | ANP | Protein RecA | / | 0.741 | |
| 2xau | ADP | Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 | 3.6.4.13 | 0.741 | |
| 1m2o | GNP | Small COPII coat GTPase SAR1 | 3.6.5 | 0.740 | |
| 1njf | AGS | DNA polymerase III subunit tau | 2.7.7.7 | 0.740 | |
| 3sqx | ANP | ATP-dependent RNA helicase MSS116, mitochondrial | 3.6.4.13 | 0.740 | |
| 4cid | ANP | EH domain-containing protein 2 | / | 0.740 | |
| 1os1 | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.739 | |
| 1w1w | AGS | Structural maintenance of chromosomes protein 1 | / | 0.739 | |
| 1xnj | ADP | Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 | 2.7.1.25 | 0.739 | |
| 2msc | GDP | MHC class I alpha chain | / | 0.739 | |
| 3c41 | ANP | Amino acid ABC transporter | / | 0.739 | |
| 2jiz | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.737 | |
| 3bos | CDP | Regulatory inactivation of DnaA Hda protein | / | 0.736 | |
| 4jjz | ADP | Formate--tetrahydrofolate ligase | / | 0.736 | |
| 4qos | ADP | Psp operon transcriptional activator | / | 0.736 | |
| 1e1q | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.735 | |
| 2r9v | ATP | ATP synthase subunit alpha | / | 0.735 | |
| 3hu3 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.735 | |
| 1svw | GTP | Probable GTP-binding protein EngB | / | 0.733 | |
| 1w5t | ADP | ORC1-type DNA replication protein 2 | / | 0.733 | |
| 3ews | ADP | ATP-dependent RNA helicase DDX19B | 3.6.4.13 | 0.733 | |
| 3qe0 | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.733 | |
| 2i1v | ADP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 | 2.7.1.105 | 0.732 | |
| 3k3b | ADP | Kinesin-like protein KIF11 | / | 0.732 | |
| 4c0b | ATP | mRNA cleavage and polyadenylation factor CLP1 | / | 0.732 | |
| 4oi2 | ADP | Protein clpf-1 | / | 0.732 | |
| 2axn | ADP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 | / | 0.731 | |
| 2db3 | ANP | ATP-dependent RNA helicase vasa, isoform A | 3.6.4.13 | 0.731 | |
| 2zrj | AGS | Protein RecA | / | 0.730 | |
| 1p3d | ANP | UDP-N-acetylmuramate--L-alanine ligase | 6.3.2.8 | 0.729 | |
| 3zia | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.729 | |
| 4tl8 | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.729 | |
| 4tl9 | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.729 | |
| 5irn | ADP | Nucleotide binding oligomerization domain containing 2 | / | 0.729 | |
| 1xef | ATP | Alpha-hemolysin translocation ATP-binding protein HlyB | / | 0.728 | |
| 4ww0 | ADP | ATP-dependent zinc metalloprotease FtsH | / | 0.726 | |
| 1v8k | ANP | Kinesin-like protein KIF2C | / | 0.725 | |
| 3pcr | GTP | ADP-ribosylation factor 6 | / | 0.725 | |
| 2v1x | ADP | ATP-dependent DNA helicase Q1 | 3.6.4.12 | 0.724 | |
| 4ko8 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.724 | |
| 5i67 | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.724 | |
| 4bzq | ADP | Bifunctional enzyme CysN/CysC | 2.7.1.25 | 0.723 | |
| 2ql6 | ADP | Nicotinamide riboside kinase 1 | / | 0.722 | |
| 1ank | ANP | Adenylate kinase | / | 0.721 | |
| 1i4l | GDP | Ras-related C3 botulinum toxin substrate 1 | / | 0.721 | |
| 2osb | AP5 | Adenylate kinase | / | 0.721 | |
| 4d81 | ADP | AAA ATPase, central domain protein | / | 0.721 | |
| 2qf2 | GDP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.720 | |
| 4xvu | ATP | ATPase GET3 | / | 0.720 | |
| 4nh0 | ATP | ESX secretion system protein EccC | / | 0.717 | |
| 1fnn | ADP | ORC1-type DNA replication protein | / | 0.716 | |
| 3hu1 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.716 | |
| 2zr9 | DTP | Protein RecA | / | 0.715 | |
| 3hqd | ANP | Kinesin-like protein KIF11 | / | 0.715 | |
| 3thy | ADP | DNA mismatch repair protein Msh2 | / | 0.715 | |
| 2vf7 | ADP | UvrABC system protein A | / | 0.714 | |
| 3hu2 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.714 | |
| 1e79 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.713 | |
| 1e79 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.713 | |
| 3oee | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.713 | |
| 3oee | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.713 | |
| 4kln | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.713 | |
| 1xbt | TTP | Thymidine kinase, cytosolic | 2.7.1.21 | 0.712 | |
| 1r0z | ATP | Cystic fibrosis transmembrane conductance regulator | / | 0.711 | |
| 2pc9 | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.711 | |
| 2py7 | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.711 | |
| 1svl | ADP | Large T antigen | 3.6.4 | 0.710 | |
| 1svm | ATP | Large T antigen | 3.6.4 | 0.710 | |
| 3mle | ADP | ATP-dependent dethiobiotin synthetase BioD | 6.3.3.3 | 0.710 | |
| 1y3a | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.707 | |
| 2fah | GDP | Phosphoenolpyruvate carboxykinase [GTP], mitochondrial | 4.1.1.32 | 0.705 | |
| 3t1t | GDP | Probable gliding protein mglA | / | 0.705 | |
| 4ol0 | GTP | GTP-binding nuclear protein Ran | / | 0.705 | |
| 4qnr | ATP | Psp operon transcriptional activator | / | 0.705 | |
| 4wou | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.705 | |
| 1sxj | AGS | Replication factor C subunit 1 | / | 0.704 | |
| 3c15 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.704 | |
| 3fkq | ATP | NtrC-like two-domain protein | / | 0.704 | |
| 2ck3 | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.703 | |
| 2ck3 | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.703 | |
| 2xto | GDP | GTPase IMAP family member 2 | / | 0.703 | |
| 4i1v | ADP | Dephospho-CoA kinase | / | 0.703 | |
| 2bif | ANP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 | 2.7.1.105 | 0.702 | |
| 3fmo | ADP | ATP-dependent RNA helicase DDX19B | 3.6.4.13 | 0.702 | |
| 2fgj | ATP | Alpha-hemolysin translocation ATP-binding protein HlyB | / | 0.701 | |
| 4a51 | ADP | Kinesin-like protein KIF11 | / | 0.699 | |
| 2j7p | GNP | Signal recognition particle protein | / | 0.698 | |
| 2j7p | GNP | Signal recognition particle receptor FtsY | / | 0.698 | |
| 2xtn | GTP | GTPase IMAP family member 2 | / | 0.698 | |
| 1w7k | ADP | Dihydrofolate synthase/folylpolyglutamate synthase | 6.3.2.12 | 0.697 | |
| 1bmf | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.696 | |
| 1bmf | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.696 | |
| 1okk | GCP | Signal recognition particle protein | / | 0.696 | |
| 1okk | GCP | Signal recognition particle receptor FtsY | / | 0.696 | |
| 1w5s | ADP | ORC1-type DNA replication protein 2 | / | 0.695 | |
| 5cyp | GSP | Septin-9 | / | 0.695 | |
| 2iut | AGS | DNA translocase FtsK | / | 0.693 | |
| 4bec | ATP | Type I restriction enzyme EcoR124II R protein | 3.1.21.3 | 0.692 | |
| 3moh | GDP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.691 | |
| 4hi0 | GDP | Urease accessory protein UreG | / | 0.690 | |
| 3q9l | ATP | Septum site-determining protein MinD | / | 0.688 | |
| 4cvl | ACP | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase | / | 0.688 | |
| 5da9 | AGS | Uncharacterized protein | / | 0.687 | |
| 1esn | ANP | Pantothenate kinase | 2.7.1.33 | 0.685 | |
| 2hld | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.685 | |
| 2hld | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.685 | |
| 4c30 | ANP | DNA helicase | / | 0.685 | |
| 1s3s | ADP | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.682 | |
| 2zpa | ADP | tRNA(Met) cytidine acetyltransferase TmcA | / | 0.682 | |
| 4wpu | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.682 | |
| 1k6m | AGS | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 | 2.7.1.105 | 0.679 | |
| 1oe0 | TTP | Deoxynucleoside kinase | / | 0.679 | |
| 2pg2 | ADP | Kinesin-like protein KIF11 | / | 0.679 | |
| 4g5q | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.678 | |
| 2fl2 | ADP | Kinesin-like protein KIF11 | / | 0.677 | |
| 3oeh | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.676 | |
| 3qcz | ANP | Dihydrofolate synthase/folylpolyglutamate synthase | / | 0.676 | |
| 4hut | ATP | Cob(I)yrinic acid a,c-diamide adenosyltransferase | 2.5.1.17 | 0.676 | |
| 4r9u | ANP | Vitamin B12 import ATP-binding protein BtuD | / | 0.676 | |
| 1ny5 | ADP | Transcriptional regulator (NtrC family) | / | 0.675 | |
| 1p9w | ANP | Type II secretion system protein E | / | 0.675 | |
| 1in5 | ADP | Holliday junction ATP-dependent DNA helicase RuvB | / | 0.674 | |
| 4hse | ADP | Chaperone protein ClpB | / | 0.674 | |
| 4yer | ADP | Antibiotic ABC transporter, ATP-binding protein, putative | / | 0.674 | |
| 2x7e | ADP | Kinesin-like protein KIF11 | / | 0.672 | |
| 4ohx | ADP | Protein clpf-1 | / | 0.672 | |
| 1nly | AGS | Cag alpha | / | 0.671 | |
| 5dac | AGS | Uncharacterized protein | / | 0.671 | |
| 3c14 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.670 | |
| 3zl8 | ADP | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase | / | 0.670 | |
| 2x2r | ADP | Kinesin-like protein KIF11 | / | 0.669 | |
| 2xsz | ATP | RuvB-like 2 | 3.6.4.12 | 0.669 | |
| 1h8h | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.668 | |
| 1h8h | ATP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.668 | |
| 4mkg | AP5 | Adenylate kinase | / | 0.668 | |
| 4fid | GDP | G protein alpha subunit, putative | / | 0.667 | |
| 4iei | ADP | Gene 2 protein | / | 0.667 | |
| 1h8h | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.665 | |
| 1h8h | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.665 | |
| 3l1c | ADP | Protein claret segregational | / | 0.665 | |
| 4ihj | GTP | Tubulin alpha-1B chain | / | 0.665 | |
| 4ohv | ANP | Protein clpf-1 | / | 0.665 | |
| 5ftf | ADP | TPR domain protein | / | 0.664 | |
| 5k5z | ANP | Uncharacterized protein | / | 0.664 | |
| 2zsb | ADP | Pantothenate kinase | 2.7.1.33 | 0.663 | |
| 3af0 | GDP | Pantothenate kinase | 2.7.1.33 | 0.661 | |
| 2e8w | IPE | Geranylgeranyl pyrophosphate synthase | / | 0.658 | |
| 4e07 | ACP | Plasmid partitioning protein ParF | / | 0.658 | |
| 4wbn | GTP | Tubulin alpha-1B chain | / | 0.658 | |
| 1ofh | ADP | ATP-dependent protease ATPase subunit HslU | / | 0.657 | |
| 2jcs | TTP | Deoxynucleoside kinase | / | 0.657 | |
| 3jvv | ACP | Twitching mobility protein | / | 0.657 | |
| 2aky | AP5 | Adenylate kinase | / | 0.656 | |
| 1ohh | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.655 | |
| 1ohh | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.655 | |
| 3uk6 | ADP | RuvB-like 2 | 3.6.4.12 | 0.655 | |
| 3ieu | GDP | GTPase Era | / | 0.654 | |
| 3pyz | ANP | Dihydrofolate synthase/folylpolyglutamate synthase | / | 0.654 | |
| 1g9r | UPF | LgtC | / | 0.652 | |
| 2oo7 | AP5 | Adenylate kinase | / | 0.652 | |
| 2rgx | AP5 | Adenylate kinase | / | 0.652 | |
| 3tif | ADP | Uncharacterized ABC transporter ATP-binding protein MJ0796 | / | 0.652 | |
| 2iuu | ADP | DNA translocase FtsK | / | 0.651 | |
| 2qaj | AP5 | Adenylate kinase | / | 0.651 |