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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4qms 1N1 Serine/threonine-protein kinase 24 2.7.11.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4qms 1N1Serine/threonine-protein kinase 24 2.7.11.1 0.958
2hzi JINTyrosine-protein kinase ABL1 2.7.10.2 0.699
4xli 1N1Abelson tyrosine-protein kinase 2 2.7.10.2 0.698
2y6o 1N1Ephrin type-A receptor 4 2.7.10.1 0.671
4qmn DB8Serine/threonine-protein kinase 24 2.7.11.1 0.669
2z2w 770Wee1-like protein kinase 2.7.10.2 0.667
2zva 1N1Tyrosine-protein kinase Lyn 2.7.10.2 0.661
3qlg 1N1Proto-oncogene tyrosine-protein kinase Src 2.7.10.2 0.661
3fml FMLMitogen-activated protein kinase 14 / 0.660
4xey 1N1Tyrosine-protein kinase ABL1 2.7.10.2 0.658
2zm1 KSFTyrosine-protein kinase Lck 2.7.10.2 0.655
3oct 1N1Tyrosine-protein kinase BTK 2.7.10.2 0.650