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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4oez DHT Androgen receptor

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4oez DHTAndrogen receptor / 1.157
1t79 DHTAndrogen receptor / 1.129
4oea DHTAndrogen receptor / 1.125
2piu DHTAndrogen receptor / 1.123
1t73 DHTAndrogen receptor / 1.118
1t74 DHTAndrogen receptor / 1.117
2pit DHTAndrogen receptor / 1.116
2pio DHTAndrogen receptor / 1.115
2ama DHTAndrogen receptor / 1.112
1t7r DHTAndrogen receptor / 1.111
4oey DHTAndrogen receptor / 1.109
2piv DHTAndrogen receptor / 1.108
1t5z DHTAndrogen receptor / 1.107
2pip DHTAndrogen receptor / 1.102
1t7f DHTAndrogen receptor / 1.097
2pkl DHTAndrogen receptor / 1.082
2z4j DHTAndrogen receptor / 1.079
1t7m DHTAndrogen receptor / 1.075
4ofr DHTAndrogen receptor / 1.075
1t76 DHTAndrogen receptor / 1.067
1t65 DHTAndrogen receptor / 1.061
2piq DHTAndrogen receptor / 1.059
2piw DHTAndrogen receptor / 1.047
2pix DHTAndrogen receptor / 1.041
4oed DHTAndrogen receptor / 1.025
2qpy DHTAndrogen receptor / 1.018
2ylp TESAndrogen receptor / 0.992
2q7k TESAndrogen receptor / 0.960
1xj7 DHTAndrogen receptor / 0.947
2pnu ENMAndrogen receptor / 0.928
4hlw TESAndrogen receptor / 0.893
2ao6 R18Androgen receptor / 0.874
2q7i TESAndrogen receptor / 0.858
2q7j TESAndrogen receptor / 0.842
2q7l TESAndrogen receptor / 0.820
2am9 TESAndrogen receptor / 0.818
1xow R18Androgen receptor / 0.793
2yhd TESAndrogen receptor / 0.793
1t63 DHTAndrogen receptor / 0.783
1t7t DHTAndrogen receptor / 0.775
4e5l DBHPolymerase acidic protein / 0.764
2ylq TESAndrogen receptor / 0.756
1xq3 R18Androgen receptor / 0.754
4ofu DHTAndrogen receptor / 0.754
3zqt TESAndrogen receptor / 0.746
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
1gs4 ZK5Androgen receptor / 0.740
2pir DHTAndrogen receptor / 0.731
1qyw 5SDEstradiol 17-beta-dehydrogenase 1 1.1.1.62 0.721
4j24 ESTEstrogen receptor beta / 0.718
2yja ESTEstrogen receptor / 0.711
3uzz ASD3-oxo-5-beta-steroid 4-dehydrogenase / 0.710
4j26 ESTEstrogen receptor beta / 0.702
4pxm ESTEstrogen receptor / 0.699
1lho AOMSex hormone-binding globulin / 0.684
4k7a DHTAndrogen receptor / 0.684
1lri CLRBeta-elicitin cryptogein / 0.682
1osv CHCBile acid receptor / 0.680
2d09 FLVBiflaviolin synthase CYP158A2 / 0.680
3uzx AOX3-oxo-5-beta-steroid 4-dehydrogenase / 0.680
2ylo TESAndrogen receptor / 0.679
4at2 ASDPossible succinate dehydrogenase / 0.679
4qe6 JN3Bile acid receptor / 0.679
1e3k R18Progesterone receptor / 0.678
4q0a 4OAVitamin D3 receptor A / 0.668
1lhn AONSex hormone-binding globulin / 0.666
3cot STR3-oxo-5-beta-steroid 4-dehydrogenase / 0.665
1xf0 ASDAldo-keto reductase family 1 member C3 / 0.662
2j7x ESTEstrogen receptor beta / 0.662
3g1r FIT3-oxo-5-beta-steroid 4-dehydrogenase / 0.660
3ols ESTEstrogen receptor beta / 0.660
4e5f 0N7Polymerase acidic protein / 0.660
2amb 17HAndrogen receptor / 0.656
2mm3 CHOGastrotropin / 0.656
2p15 EZTEstrogen receptor / 0.655
3nbr ASDSteroid Delta-isomerase 5.3.3.1 0.652
2yne NHWGlycylpeptide N-tetradecanoyltransferase / 0.650