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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4ock ANP N-acetylhexosamine 1-kinase 2.7.1.162

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4ock ANPN-acetylhexosamine 1-kinase 2.7.1.162 1.020
4ocp ADPN-acetylhexosamine 1-kinase 2.7.1.162 0.772
4nif ANPMitogen-activated protein kinase 1 2.7.11.24 0.753
2y9q ANPMitogen-activated protein kinase 1 2.7.11.24 0.731
4axf ANPInositol-pentakisphosphate 2-kinase 2.7.1.158 0.724
3dfc ANPDeath-associated protein kinase 1 2.7.11.1 0.721
4wh3 ATPN-acetylhexosamine 1-kinase 2.7.1.162 0.704
4ocv ANPAminoglycoside phosphotransferase / 0.699
4wh2 ADPN-acetylhexosamine 1-kinase 2.7.1.162 0.699
4aqk ADPInositol-pentakisphosphate 2-kinase 2.7.1.158 0.687
2xan ANPInositol-pentakisphosphate 2-kinase 2.7.1.158 0.684
2p0a ANPSynapsin-3 / 0.672
4x6r ATPcAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.669
4dt8 ADNAPH(2'')-Id / 0.668
5e92 ANPTGF-beta receptor type-2 2.7.11.30 0.668
3udz ADPInositol-pentakisphosphate 2-kinase 2.7.1.158 0.667
4ic7 ANPMitogen-activated protein kinase 7 2.7.11.24 0.667
4h3q ANPMitogen-activated protein kinase 1 2.7.11.24 0.666
4lv7 ADPInositol-pentakisphosphate 2-kinase 2.7.1.158 0.666
4azw ATPO-antigen chain terminator bifunctional methyltransferase/kinase WbdD / 0.665
4bl1 ANPMaternal embryonic leucine zipper kinase 2.7.11.1 0.664
5cvf ATPCasein kinase II subunit alpha 2.7.11.1 0.664
3w8q AGSDual specificity mitogen-activated protein kinase kinase 1 2.7.12.2 0.660
4ux9 ANPMitogen-activated protein kinase 8 2.7.11.24 0.659
3llt ANPProtein serine/threonine kinase-1 / 0.657
4ffr ATPUncharacterized protein / 0.656
3nsz ANPCasein kinase II subunit alpha 2.7.11.1 0.654
3ort AGSSerine/threonine protein kinase / 0.652
4bfm ANPMaternal embryonic leucine zipper kinase 2.7.11.1 0.652
2pyw ADPMethylthioribose kinase 2.7.1.100 0.651
4iir ANPSerine/threonine-protein kinase PRP4 homolog 2.7.11.1 0.651
4fmq ANPMitogen-activated protein kinase 1 2.7.11.24 0.650