Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4nk9 2K5 Fibroblast growth factor receptor 1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4nk9 2K5Fibroblast growth factor receptor 1 / 1.157
4f65 0S9Fibroblast growth factor receptor 1 / 0.768
2fgi PD1Fibroblast growth factor receptor 1 / 0.722
3w16 P9JAurora kinase A 2.7.11.1 0.684
4c61 LMMTyrosine-protein kinase JAK2 / 0.677
4f63 0S7Fibroblast growth factor receptor 1 / 0.673
3lfa 1N1Mitogen-activated protein kinase 14 / 0.672
4nks 2M2Fibroblast growth factor receptor 1 / 0.665
4bdh WVISerine/threonine-protein kinase Chk2 2.7.11.1 0.656
3oct 1N1Tyrosine-protein kinase BTK 2.7.10.2 0.654