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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4mt9 2D6 Tankyrase-1 2.4.2.30

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4mt9 2D6Tankyrase-1 2.4.2.30 1.314
4msg 2C6Tankyrase-1 2.4.2.30 0.879
4i9i 1DYTankyrase-1 2.4.2.30 0.845
4msk 2C8Tankyrase-1 2.4.2.30 0.775
4bux F35Tankyrase-2 2.4.2.30 0.735
4bus 32FTankyrase-2 2.4.2.30 0.734
4but 31FTankyrase-2 2.4.2.30 0.734
4k4e K4ETankyrase-1 2.4.2.30 0.733
4bu9 08CTankyrase-2 2.4.2.30 0.732
4buv 16ITankyrase-2 2.4.2.30 0.732
3kr8 XAVTankyrase-2 2.4.2.30 0.728
4tjy 3GNTankyrase-2 2.4.2.30 0.728
4buw F33Tankyrase-2 2.4.2.30 0.720
4avu LDRTankyrase-2 2.4.2.30 0.719
4bjb P34Tankyrase-2 2.4.2.30 0.712
4buu F38Tankyrase-2 2.4.2.30 0.708
4li7 1XPTankyrase-1 2.4.2.30 0.707
3c49 KU8Poly [ADP-ribose] polymerase 3 2.4.2.30 0.702
4hki FLNTankyrase-2 2.4.2.30 0.700
4l09 1URTankyrase-2 2.4.2.30 0.699
4kzl 20DTankyrase-2 2.4.2.30 0.697
4gv7 MEWPoly [ADP-ribose] polymerase 1 2.4.2.30 0.689
4pnm NU1Tankyrase-2 2.4.2.30 0.687
3u9y 09LTankyrase-2 2.4.2.30 0.686
5ds3 09LPoly [ADP-ribose] polymerase 1 2.4.2.30 0.686
4hlf 15ZTankyrase-2 2.4.2.30 0.684
5dsy UHBPoly [ADP-ribose] polymerase 2 2.4.2.30 0.684
3c4h DRLPoly [ADP-ribose] polymerase 3 2.4.2.30 0.683
4hlg 20BTankyrase-2 2.4.2.30 0.682
3l3m A92Poly [ADP-ribose] polymerase 1 2.4.2.30 0.673
4l0t 1V0Tankyrase-2 2.4.2.30 0.667
4kzu A73Tankyrase-2 2.4.2.30 0.665
4li8 1XQTankyrase-1 2.4.2.30 0.664
4n3r 2GUTankyrase-1 2.4.2.30 0.663
4tkg 09LTankyrase-2 2.4.2.30 0.660
1efy BZCPoly [ADP-ribose] polymerase 1 2.4.2.30 0.655
3b78 NADExotoxin A 2.4.2.36 0.652
4bj9 UHBTankyrase-2 2.4.2.30 0.651
4hmh F94Tankyrase-2 2.4.2.30 0.650