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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4msk 2C8 Tankyrase-1 2.4.2.30

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4msk 2C8Tankyrase-1 2.4.2.30 1.301
4i9i 1DYTankyrase-1 2.4.2.30 0.957
4msg 2C6Tankyrase-1 2.4.2.30 0.802
4li6 1XOTankyrase-1 2.4.2.30 0.778
4mt9 2D6Tankyrase-1 2.4.2.30 0.775
4li8 1XQTankyrase-1 2.4.2.30 0.764
4bud 29FTankyrase-2 2.4.2.30 0.726
4buv 16ITankyrase-2 2.4.2.30 0.721
4bus 32FTankyrase-2 2.4.2.30 0.708
4but 31FTankyrase-2 2.4.2.30 0.706
4bu9 08CTankyrase-2 2.4.2.30 0.704
4l0s 1UZTankyrase-2 2.4.2.30 0.696
4bjb P34Tankyrase-2 2.4.2.30 0.693
3kr8 XAVTankyrase-2 2.4.2.30 0.692
4buf F36Tankyrase-2 2.4.2.30 0.692
4avw G18Tankyrase-2 2.4.2.30 0.691
4buu F38Tankyrase-2 2.4.2.30 0.691
4bux F35Tankyrase-2 2.4.2.30 0.691
4l09 1URTankyrase-2 2.4.2.30 0.691
4gv7 MEWPoly [ADP-ribose] polymerase 1 2.4.2.30 0.690
4hki FLNTankyrase-2 2.4.2.30 0.690
5aku 29FTankyrase-2 2.4.2.30 0.690
4pnm NU1Tankyrase-2 2.4.2.30 0.689
4avu LDRTankyrase-2 2.4.2.30 0.687
4kzl 20DTankyrase-2 2.4.2.30 0.685
4bui W2ETankyrase-2 2.4.2.30 0.681
4gv2 5MEPoly [ADP-ribose] polymerase 3 2.4.2.30 0.679
4pnr G18Tankyrase-2 2.4.2.30 0.676
4hlh 20DTankyrase-2 2.4.2.30 0.675
2rd6 78PPoly [ADP-ribose] polymerase 1 2.4.2.30 0.674
3u9y 09LTankyrase-2 2.4.2.30 0.674
4hlm 16STankyrase-2 2.4.2.30 0.674
4tjy 3GNTankyrase-2 2.4.2.30 0.673
3gn7 3GNPoly [ADP-ribose] polymerase 1 2.4.2.30 0.672
4bs4 A64Tankyrase-2 2.4.2.30 0.670
4buw F33Tankyrase-2 2.4.2.30 0.665
4bue JQFTankyrase-2 2.4.2.30 0.664
3nrr D16Bifunctional dihydrofolate reductase-thymidylate synthase / 0.661
4l10 A63Tankyrase-2 2.4.2.30 0.658
5ewk P34Putative secreted protein / 0.658
4l0i 1UWTankyrase-2 2.4.2.30 0.657
4l2f 1V3Tankyrase-2 2.4.2.30 0.657
4hkn LU2Tankyrase-2 2.4.2.30 0.653
4l2g 1V4Tankyrase-2 2.4.2.30 0.651
4l33 F70Tankyrase-2 2.4.2.30 0.651