Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
4mrx | CZH | Obelin |
PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
---|---|---|---|---|---|
4mrx | CZH | Obelin | / | 1.177 | |
1qv0 | CZH | Obelin | / | 1.057 | |
4n1f | CZH | Obelin | / | 1.016 | |
1sl9 | CZH | Obelin | / | 1.010 | |
1el4 | CTZ | Obelin | / | 0.999 | |
1jf0 | CZH | Obelin | / | 0.987 | |
1qv1 | CZH | Obelin | / | 0.958 | |
1jf2 | CZH | Obelin | / | 0.930 | |
4nqg | CZH | Mitrocomin | / | 0.804 | |
1uhj | CZB | Aequorin-2 | / | 0.801 | |
1s36 | CEI | Obelin | / | 0.738 | |
1uhh | CZP | Aequorin-2 | / | 0.671 |