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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4m2r BZ1 Carbonic anhydrase 2 4.2.1.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4m2r BZ1Carbonic anhydrase 2 4.2.1.1 0.899
1a42 BZUCarbonic anhydrase 2 4.2.1.1 0.824
1cil ETSCarbonic anhydrase 2 4.2.1.1 0.817
1bnv AL7Carbonic anhydrase 2 4.2.1.1 0.787
4m2v BZ1Carbonic anhydrase 2 4.2.1.1 0.778
1bnm AL8Carbonic anhydrase 2 4.2.1.1 0.765
1bnq AL4Carbonic anhydrase 2 4.2.1.1 0.759
3n4b WWZCarbonic anhydrase 2 4.2.1.1 0.757
4k13 ETSCarbonic anhydrase 2 4.2.1.1 0.754
3s8x E59Carbonic anhydrase 2 4.2.1.1 0.751
1bnt AL2Carbonic anhydrase 2 4.2.1.1 0.745
3oyq OYQCarbonic anhydrase 2 4.2.1.1 0.739
4uov AZMCarbonate dehydratase / 0.731
3n2p AYXCarbonic anhydrase 2 4.2.1.1 0.728
1bnw TPDCarbonic anhydrase 2 4.2.1.1 0.725
3dd0 EZLCarbonic anhydrase 2 4.2.1.1 0.724
1g52 F2BCarbonic anhydrase 2 4.2.1.1 0.723
1i8z INLCarbonic anhydrase 2 4.2.1.1 0.721
3m40 J45Carbonic anhydrase 2 4.2.1.1 0.721
3sbh E65Carbonic anhydrase 2 4.2.1.1 0.720
3sbi E90Carbonic anhydrase 2 4.2.1.1 0.720
1i9q IOFCarbonic anhydrase 2 4.2.1.1 0.718
1bnu AL3Carbonic anhydrase 2 4.2.1.1 0.717
3dcw EZLCarbonic anhydrase 2 4.2.1.1 0.717
3n3j WWVCarbonic anhydrase 2 4.2.1.1 0.717
1kwq SG1Carbonic anhydrase 2 4.2.1.1 0.716
3n0n P9BCarbonic anhydrase 2 4.2.1.1 0.715
1g1d FSBCarbonic anhydrase 2 4.2.1.1 0.713
1g45 FSBCarbonic anhydrase 2 4.2.1.1 0.709
3d8w D8WCarbonic anhydrase 2 4.2.1.1 0.709
1g4j FFBCarbonic anhydrase 2 4.2.1.1 0.708
1g4o BSBCarbonic anhydrase 2 4.2.1.1 0.708
3fw3 ETSCarbonic anhydrase 4 4.2.1.1 0.706
1cnx EG2Carbonic anhydrase 2 4.2.1.1 0.704
4ilx 1EZCarbonic anhydrase 2 4.2.1.1 0.702
4itp 1GDCarbonic anhydrase 2 4.2.1.1 0.702
3mzc S6ICarbonic anhydrase 2 4.2.1.1 0.701
3rz8 RZ8Carbonic anhydrase 2 4.2.1.1 0.701
1bn1 AL5Carbonic anhydrase 2 4.2.1.1 0.700
2weg FBVCarbonic anhydrase 2 4.2.1.1 0.700
1bn4 AL9Carbonic anhydrase 2 4.2.1.1 0.699
3oy0 OY0Carbonic anhydrase 2 4.2.1.1 0.699
1cny EG3Carbonic anhydrase 2 4.2.1.1 0.698
1if4 FBSCarbonic anhydrase 2 4.2.1.1 0.698
3eft 3BSCarbonic anhydrase 2 4.2.1.1 0.698
1rj6 AZMCarbonic anhydrase 14 4.2.1.1 0.696
1zsb AZMCarbonic anhydrase 2 4.2.1.1 0.696
2wej FB2Carbonic anhydrase 2 4.2.1.1 0.695
3mhc ARZCarbonic anhydrase 2 4.2.1.1 0.693
3mhl J71Carbonic anhydrase 2 4.2.1.1 0.693
4xiw AZMCarbonic anhydrase, alpha type / 0.693
2weo FBWCarbonic anhydrase 2 4.2.1.1 0.689
4x5s AZMCarbonic anhydrase (Carbonate dehydratase) / 0.689
1if8 SBSCarbonic anhydrase 2 4.2.1.1 0.688
4ito MPXCarbonic anhydrase 2 4.2.1.1 0.688
1i9n IOACarbonic anhydrase 2 4.2.1.1 0.687
3dbu D8WCarbonic anhydrase 2 4.2.1.1 0.687
4bf6 X0QCarbonic anhydrase 2 4.2.1.1 0.686
1g54 FFBCarbonic anhydrase 2 4.2.1.1 0.685
1okn STBCarbonic anhydrase 2 4.2.1.1 0.685
3kig DA4Carbonic anhydrase 2 4.2.1.1 0.684
4bf1 9FKCarbonic anhydrase 2 4.2.1.1 0.684
1cnw EG1Carbonic anhydrase 2 4.2.1.1 0.683
3nb5 R21Carbonic anhydrase 2 4.2.1.1 0.682
4kap 1QVCarbonic anhydrase 2 4.2.1.1 0.681
1jd0 AZMCarbonic anhydrase 12 4.2.1.1 0.680
3dcc D9ZCarbonic anhydrase 2 4.2.1.1 0.680
3dcs MZMCarbonic anhydrase 2 4.2.1.1 0.680
1dmy AZMCarbonic anhydrase 5A, mitochondrial 4.2.1.1 0.679
3d9z D9ZCarbonic anhydrase 2 4.2.1.1 0.679
1if7 SBRCarbonic anhydrase 2 4.2.1.1 0.677
3m2n J74Carbonic anhydrase 2 4.2.1.1 0.676
3ni5 C1HCarbonic anhydrase 2 4.2.1.1 0.675
1i90 INMCarbonic anhydrase 2 4.2.1.1 0.674
3dd8 2C7Carbonic anhydrase 2 4.2.1.1 0.674
1bzm MZMCarbonic anhydrase 1 4.2.1.1 0.672
1xpz 4TZCarbonic anhydrase 2 4.2.1.1 0.672
1bnn AL1Carbonic anhydrase 2 4.2.1.1 0.670
3v2j AZMCarbonic anhydrase 2 4.2.1.1 0.669
3mho J43Carbonic anhydrase 2 4.2.1.1 0.668
3znc BZ1Carbonic anhydrase 4 4.2.1.1 0.666
1bn3 AL6Carbonic anhydrase 2 4.2.1.1 0.665
2nn7 M29Carbonic anhydrase 1 4.2.1.1 0.664
4dz7 D02Carbonic anhydrase 2 4.2.1.1 0.663
1oq5 CELCarbonic anhydrase 2 4.2.1.1 0.662
4k0z MZMCarbonic anhydrase 2 4.2.1.1 0.662
1i9p IOECarbonic anhydrase 2 4.2.1.1 0.661
3m98 E02Carbonic anhydrase 2 4.2.1.1 0.660
3m5e JDRCarbonic anhydrase 2 4.2.1.1 0.659
3m67 E36Carbonic anhydrase 2 4.2.1.1 0.659
4lu3 AZMCarbonic anhydrase 14 4.2.1.1 0.659
2h4n AZMCarbonic anhydrase 2 4.2.1.1 0.654
2weh FB1Carbonic anhydrase 2 4.2.1.1 0.654
3b4f TUOCarbonic anhydrase 2 4.2.1.1 0.653
4kp8 E1GCarbonic anhydrase 12 4.2.1.1 0.653
2eu3 FF3Carbonic anhydrase 2 4.2.1.1 0.651
2nmx M25Carbonic anhydrase 1 4.2.1.1 0.650
3f7u AG4Carbonic anhydrase 4 4.2.1.1 0.650