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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4lwa Q13 Nitric oxide synthase oxygenase 1.14.13.165

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4lwa Q13Nitric oxide synthase oxygenase 1.14.13.165 0.961
4y8v ADPAcyl-CoA synthetase (NDP forming) / 0.744
4k5f Q14Nitric oxide synthase, brain 1.14.13.39 0.742
4uga Q05Nitric oxide synthase oxygenase 1.14.13.165 0.732
4ug9 1EWNitric oxide synthase oxygenase 1.14.13.165 0.711
4lwb QJ8Nitric oxide synthase oxygenase 1.14.13.165 0.710
4ug7 1EVNitric oxide synthase oxygenase 1.14.13.165 0.706
3tym 08RNitric oxide synthase, brain 1.14.13.39 0.700
4ug5 XFKNitric oxide synthase oxygenase 1.14.13.165 0.700
3jx4 J11Nitric oxide synthase, brain 1.14.13.39 0.699
3n66 XFNNitric oxide synthase, brain 1.14.13.39 0.688
4jsg Q10Nitric oxide synthase, brain 1.14.13.39 0.688
3jwu J11Nitric oxide synthase, brain 1.14.13.39 0.687
1r35 I58Nitric oxide synthase, inducible 1.14.13.39 0.685
3ufr H5WNitric oxide synthase, brain 1.14.13.39 0.684
3n60 XFNNitric oxide synthase, brain 1.14.13.39 0.681
4k5e 1Q7Nitric oxide synthase, brain 1.14.13.39 0.681
4jsf QJ4Nitric oxide synthase, brain 1.14.13.39 0.679
3jx5 J14Nitric oxide synthase, brain 1.14.13.39 0.677
3n61 XFJNitric oxide synthase, brain 1.14.13.39 0.677
4k5g Q13Nitric oxide synthase, brain 1.14.13.39 0.677
3n62 XFJNitric oxide synthase, brain 1.14.13.39 0.676
4eux HW1Nitric oxide synthase, brain 1.14.13.39 0.675
3jx2 JI4Nitric oxide synthase, brain 1.14.13.39 0.672
3nlr JRSNitric oxide synthase, brain 1.14.13.39 0.672
3n63 XFNNitric oxide synthase, brain 1.14.13.39 0.671
3nln JRSNitric oxide synthase, brain 1.14.13.39 0.671
4jsh Q15Nitric oxide synthase, brain 1.14.13.39 0.671
3e68 AT6Nitric oxide synthase, inducible 1.14.13.39 0.670
4lux QJ8Nitric oxide synthase, brain 1.14.13.39 0.670
3nlv 3XANitric oxide synthase, brain 1.14.13.39 0.669
3nlw 3XFNitric oxide synthase, brain 1.14.13.39 0.668
3b3p JI7Nitric oxide synthase, brain 1.14.13.39 0.666
3n5x XFKNitric oxide synthase, brain 1.14.13.39 0.666
3n65 XFJNitric oxide synthase, brain 1.14.13.39 0.664
3jx0 JI4Nitric oxide synthase, brain 1.14.13.39 0.661
3nlp JSSNitric oxide synthase, brain 1.14.13.39 0.661
3dqr JI2Nitric oxide synthase, brain 1.14.13.39 0.660
3jws JI4Nitric oxide synthase, brain 1.14.13.39 0.656
3n5w XFJNitric oxide synthase, brain 1.14.13.39 0.654
3nlo JSRNitric oxide synthase, brain 1.14.13.39 0.653
4imu 1ETNitric oxide synthase, brain 1.14.13.39 0.652
4imw 1EVNitric oxide synthase, brain 1.14.13.39 0.651