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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4lu3 AZM Carbonic anhydrase 14 4.2.1.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4lu3 AZMCarbonic anhydrase 14 4.2.1.1 0.857
4iwz 1GOCarbonic anhydrase 2 4.2.1.1 0.798
1rj6 AZMCarbonic anhydrase 14 4.2.1.1 0.777
3dc3 AZMCarbonic anhydrase 2 4.2.1.1 0.777
3v2j AZMCarbonic anhydrase 2 4.2.1.1 0.777
4xiw AZMCarbonic anhydrase, alpha type / 0.776
3mhc ARZCarbonic anhydrase 2 4.2.1.1 0.773
4uov AZMCarbonate dehydratase / 0.772
1zsb AZMCarbonic anhydrase 2 4.2.1.1 0.756
4k0z MZMCarbonic anhydrase 2 4.2.1.1 0.749
1dmy AZMCarbonic anhydrase 5A, mitochondrial 4.2.1.1 0.736
4k0t D9ZCarbonic anhydrase 2 4.2.1.1 0.735
4bf6 X0QCarbonic anhydrase 2 4.2.1.1 0.728
2weg FBVCarbonic anhydrase 2 4.2.1.1 0.726
2h4n AZMCarbonic anhydrase 2 4.2.1.1 0.725
3dcw EZLCarbonic anhydrase 2 4.2.1.1 0.724
3d8w D8WCarbonic anhydrase 2 4.2.1.1 0.723
4ito MPXCarbonic anhydrase 2 4.2.1.1 0.723
1if4 FBSCarbonic anhydrase 2 4.2.1.1 0.722
3dbu D8WCarbonic anhydrase 2 4.2.1.1 0.722
1jd0 AZMCarbonic anhydrase 12 4.2.1.1 0.720
4k13 ETSCarbonic anhydrase 2 4.2.1.1 0.719
3ni5 C1HCarbonic anhydrase 2 4.2.1.1 0.718
3dcc D9ZCarbonic anhydrase 2 4.2.1.1 0.717
4x5s AZMCarbonic anhydrase (Carbonate dehydratase) / 0.717
1bnt AL2Carbonic anhydrase 2 4.2.1.1 0.716
1cil ETSCarbonic anhydrase 2 4.2.1.1 0.716
3mna DWHCarbonic anhydrase 2 4.2.1.1 0.715
3n2p AYXCarbonic anhydrase 2 4.2.1.1 0.715
3dd0 EZLCarbonic anhydrase 2 4.2.1.1 0.713
1bzm MZMCarbonic anhydrase 1 4.2.1.1 0.709
3mmf D9HCarbonic anhydrase 2 4.2.1.1 0.709
3kig DA4Carbonic anhydrase 2 4.2.1.1 0.708
3m98 E02Carbonic anhydrase 2 4.2.1.1 0.708
3m2n J74Carbonic anhydrase 2 4.2.1.1 0.707
3igp DT7Carbonic anhydrase 2 4.2.1.1 0.706
1bnu AL3Carbonic anhydrase 2 4.2.1.1 0.705
3m40 J45Carbonic anhydrase 2 4.2.1.1 0.704
3mhi J90Carbonic anhydrase 2 4.2.1.1 0.704
4m2v BZ1Carbonic anhydrase 2 4.2.1.1 0.704
1g52 F2BCarbonic anhydrase 2 4.2.1.1 0.701
1i91 INQCarbonic anhydrase 2 4.2.1.1 0.701
3s8x E59Carbonic anhydrase 2 4.2.1.1 0.701
1g45 FSBCarbonic anhydrase 2 4.2.1.1 0.700
1g4o BSBCarbonic anhydrase 2 4.2.1.1 0.699
1g1d FSBCarbonic anhydrase 2 4.2.1.1 0.698
1okn STBCarbonic anhydrase 2 4.2.1.1 0.698
1if5 FBTCarbonic anhydrase 2 4.2.1.1 0.697
3d9z D9ZCarbonic anhydrase 2 4.2.1.1 0.697
1i8z INLCarbonic anhydrase 2 4.2.1.1 0.696
3b4f TUOCarbonic anhydrase 2 4.2.1.1 0.696
1g4j FFBCarbonic anhydrase 2 4.2.1.1 0.695
1if8 SBSCarbonic anhydrase 2 4.2.1.1 0.695
3s9t E49Carbonic anhydrase 2 4.2.1.1 0.695
3sbh E65Carbonic anhydrase 2 4.2.1.1 0.695
3sbi E90Carbonic anhydrase 2 4.2.1.1 0.695
2weo FBWCarbonic anhydrase 2 4.2.1.1 0.693
3ffp LC1Carbonic anhydrase 2 4.2.1.1 0.693
3rz8 RZ8Carbonic anhydrase 2 4.2.1.1 0.692
3mhl J71Carbonic anhydrase 2 4.2.1.1 0.690
3mho J43Carbonic anhydrase 2 4.2.1.1 0.690
3dcs MZMCarbonic anhydrase 2 4.2.1.1 0.688
3f4x KLTCarbonic anhydrase 2 4.2.1.1 0.688
3myq E27Carbonic anhydrase 2 4.2.1.1 0.687
3znc BZ1Carbonic anhydrase 4 4.2.1.1 0.686
3m67 E36Carbonic anhydrase 2 4.2.1.1 0.685
3eft 3BSCarbonic anhydrase 2 4.2.1.1 0.684
1oq5 CELCarbonic anhydrase 2 4.2.1.1 0.683
3m5e JDRCarbonic anhydrase 2 4.2.1.1 0.681
1if6 FBUCarbonic anhydrase 2 4.2.1.1 0.679
1bnv AL7Carbonic anhydrase 2 4.2.1.1 0.678
1bnw TPDCarbonic anhydrase 2 4.2.1.1 0.678
2nmx M25Carbonic anhydrase 1 4.2.1.1 0.678
1xq0 4TRCarbonic anhydrase 2 4.2.1.1 0.677
4kap 1QVCarbonic anhydrase 2 4.2.1.1 0.677
5fl4 9FKCarbonic anhydrase 9 4.2.1.1 0.676
3ml2 SU0Carbonic anhydrase 2 4.2.1.1 0.675
1okm SABCarbonic anhydrase 2 4.2.1.1 0.674
1kwr SG2Carbonic anhydrase 2 4.2.1.1 0.664
4dz7 D02Carbonic anhydrase 2 4.2.1.1 0.664
1xpz 4TZCarbonic anhydrase 2 4.2.1.1 0.663
3m96 E38Carbonic anhydrase 2 4.2.1.1 0.663
3l14 I7BCarbonic anhydrase 2 4.2.1.1 0.662
3n0n P9BCarbonic anhydrase 2 4.2.1.1 0.660
4kni E1ECarbonic anhydrase 2 4.2.1.1 0.660
4m2r BZ1Carbonic anhydrase 2 4.2.1.1 0.659
1i9p IOECarbonic anhydrase 2 4.2.1.1 0.658
2wd2 MS5Carbonic anhydrase 2 4.2.1.1 0.658
3po6 DT9Carbonic anhydrase 2 4.2.1.1 0.657
3lxe TORCarbonic anhydrase 1 4.2.1.1 0.656
3qyk IE2Carbonic anhydrase 2 4.2.1.1 0.656
2pow I7CCarbonic anhydrase 2 4.2.1.1 0.655
1bnq AL4Carbonic anhydrase 2 4.2.1.1 0.654
3n3j WWVCarbonic anhydrase 2 4.2.1.1 0.653
1if7 SBRCarbonic anhydrase 2 4.2.1.1 0.652
1yda AZMCarbonic anhydrase 2 4.2.1.1 0.651
3f7b AG5Carbonic anhydrase 4 4.2.1.1 0.651