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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4krs 1SX Tankyrase-1 2.4.2.30

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4krs 1SXTankyrase-1 2.4.2.30 0.955
5aku 29FTankyrase-2 2.4.2.30 0.677
3kr8 XAVTankyrase-2 2.4.2.30 0.675
4bue JQFTankyrase-2 2.4.2.30 0.668
1efy BZCPoly [ADP-ribose] polymerase 1 2.4.2.30 0.663
4buf F36Tankyrase-2 2.4.2.30 0.662
4bs4 A64Tankyrase-2 2.4.2.30 0.659
4bu9 08CTankyrase-2 2.4.2.30 0.655
4pnr G18Tankyrase-2 2.4.2.30 0.655
4hkk AGITankyrase-2 2.4.2.30 0.652