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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4k5f H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.948
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.940
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.940
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.925
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.925
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.924
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.924
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.924
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.923
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.923
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.923
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.923
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.922
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.917
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.909
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.908
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.908
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.906
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.906
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.905
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.905
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.904
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.903
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.903
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.902
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.902
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.901
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.893
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.889
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.888
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.888
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.888
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.887
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.887
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.887
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.886
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.886
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.885
3png H4BNitric oxide synthase, brain 1.14.13.39 0.885
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.885
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.885
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.885
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.885
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.885
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.884
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.884
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.884
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.884
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.883
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.883
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.883
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.881
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.881
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.880
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.879
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.877
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.877
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.876
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.875
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.874
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.873
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.872
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.871
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.869
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.868
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.868
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.868
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.868
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.867
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.866
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.865
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.864
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.862
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.859
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.858
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.853
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.853
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.852
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.852
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.852
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.852
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.849
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.848
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.848
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.845
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.845
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.844
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.840
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.835
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.832
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.831
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.827
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.821
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.820
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.811
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.806
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.797
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.793
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.784
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.767
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.733
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.732
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.710
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.697
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.693
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.691
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.683
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.681
4e5f 0N7Polymerase acidic protein / 0.660
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.656
1m8d H4BNitric oxide synthase, inducible 1.14.13.39 0.652