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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4k5e H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.933
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.928
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.927
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.927
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.927
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.926
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.926
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.926
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.924
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.923
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.922
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.920
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.920
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.909
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.909
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.907
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.907
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.906
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.905
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.904
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.904
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.904
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.904
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.903
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.903
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.902
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.899
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.893
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.891
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.891
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.891
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.890
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.890
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.890
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.890
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.890
3png H4BNitric oxide synthase, brain 1.14.13.39 0.890
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.890
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.890
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.890
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.890
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.890
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.889
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.888
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.888
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.888
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.887
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.887
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.887
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.885
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.884
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.884
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.883
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.877
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.875
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.875
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.873
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.873
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.872
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.872
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.870
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.869
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.869
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.868
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.868
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.868
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.867
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.867
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.866
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.866
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.864
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.864
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.863
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.863
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.863
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.857
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.855
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.854
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.852
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.851
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.851
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.851
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.850
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.850
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.846
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.845
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.842
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.842
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.841
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.839
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.839
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.836
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.835
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.834
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.833
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.829
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.827
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.807
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.805
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.793
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.784
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.765
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.761
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.756
4e5i 0N9Polymerase acidic protein / 0.744
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.736
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.728
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.722
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.713
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.709
1qw5 H4BNitric oxide synthase, inducible 1.14.13.39 0.702
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.698
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.695
1m8e H4BNitric oxide synthase, inducible 1.14.13.39 0.662
1m8h H4BNitric oxide synthase, inducible 1.14.13.39 0.660
4e5f 0N7Polymerase acidic protein / 0.660
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.659
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.658
1m8d H4BNitric oxide synthase, inducible 1.14.13.39 0.655
3nod H4BNitric oxide synthase, inducible 1.14.13.39 0.651