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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4k13 ETS Carbonic anhydrase 2 4.2.1.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4k13 ETSCarbonic anhydrase 2 4.2.1.1 0.873
1cil ETSCarbonic anhydrase 2 4.2.1.1 0.812
3fw3 ETSCarbonic anhydrase 4 4.2.1.1 0.777
4m2v BZ1Carbonic anhydrase 2 4.2.1.1 0.769
1bnt AL2Carbonic anhydrase 2 4.2.1.1 0.757
4m2r BZ1Carbonic anhydrase 2 4.2.1.1 0.754
1bnw TPDCarbonic anhydrase 2 4.2.1.1 0.749
4k0z MZMCarbonic anhydrase 2 4.2.1.1 0.743
4uov AZMCarbonate dehydratase / 0.742
1a42 BZUCarbonic anhydrase 2 4.2.1.1 0.737
1bnu AL3Carbonic anhydrase 2 4.2.1.1 0.737
1bnv AL7Carbonic anhydrase 2 4.2.1.1 0.734
4iwz 1GOCarbonic anhydrase 2 4.2.1.1 0.726
1bnm AL8Carbonic anhydrase 2 4.2.1.1 0.725
3d8w D8WCarbonic anhydrase 2 4.2.1.1 0.721
4k0t D9ZCarbonic anhydrase 2 4.2.1.1 0.721
3dd0 EZLCarbonic anhydrase 2 4.2.1.1 0.720
3n2p AYXCarbonic anhydrase 2 4.2.1.1 0.720
4lu3 AZMCarbonic anhydrase 14 4.2.1.1 0.719
3dc3 AZMCarbonic anhydrase 2 4.2.1.1 0.718
3v2j AZMCarbonic anhydrase 2 4.2.1.1 0.718
1rj6 AZMCarbonic anhydrase 14 4.2.1.1 0.715
1if4 FBSCarbonic anhydrase 2 4.2.1.1 0.714
4x5s AZMCarbonic anhydrase (Carbonate dehydratase) / 0.714
3dbu D8WCarbonic anhydrase 2 4.2.1.1 0.713
3dcs MZMCarbonic anhydrase 2 4.2.1.1 0.713
2weg FBVCarbonic anhydrase 2 4.2.1.1 0.712
3m40 J45Carbonic anhydrase 2 4.2.1.1 0.712
4xiw AZMCarbonic anhydrase, alpha type / 0.712
1jd0 AZMCarbonic anhydrase 12 4.2.1.1 0.711
3m5e JDRCarbonic anhydrase 2 4.2.1.1 0.711
3mdz EZLCarbonic anhydrase 7 4.2.1.1 0.711
3mna DWHCarbonic anhydrase 2 4.2.1.1 0.711
1bn4 AL9Carbonic anhydrase 2 4.2.1.1 0.710
3mho J43Carbonic anhydrase 2 4.2.1.1 0.710
3n0n P9BCarbonic anhydrase 2 4.2.1.1 0.710
3oy0 OY0Carbonic anhydrase 2 4.2.1.1 0.710
1zsb AZMCarbonic anhydrase 2 4.2.1.1 0.709
3dcw EZLCarbonic anhydrase 2 4.2.1.1 0.709
3dcc D9ZCarbonic anhydrase 2 4.2.1.1 0.707
3d9z D9ZCarbonic anhydrase 2 4.2.1.1 0.706
3k2f NKXCarbonic anhydrase 2 4.2.1.1 0.706
1g4o BSBCarbonic anhydrase 2 4.2.1.1 0.705
1bzm MZMCarbonic anhydrase 1 4.2.1.1 0.704
3mmf D9HCarbonic anhydrase 2 4.2.1.1 0.704
3mhl J71Carbonic anhydrase 2 4.2.1.1 0.703
3oyq OYQCarbonic anhydrase 2 4.2.1.1 0.702
3znc BZ1Carbonic anhydrase 4 4.2.1.1 0.702
2h4n AZMCarbonic anhydrase 2 4.2.1.1 0.701
1g4j FFBCarbonic anhydrase 2 4.2.1.1 0.700
1kwq SG1Carbonic anhydrase 2 4.2.1.1 0.700
3n3j WWVCarbonic anhydrase 2 4.2.1.1 0.699
4bf6 X0QCarbonic anhydrase 2 4.2.1.1 0.699
1g1d FSBCarbonic anhydrase 2 4.2.1.1 0.698
3sbh E65Carbonic anhydrase 2 4.2.1.1 0.698
4ito MPXCarbonic anhydrase 2 4.2.1.1 0.698
4itp 1GDCarbonic anhydrase 2 4.2.1.1 0.696
1if7 SBRCarbonic anhydrase 2 4.2.1.1 0.695
3rz8 RZ8Carbonic anhydrase 2 4.2.1.1 0.695
1bn1 AL5Carbonic anhydrase 2 4.2.1.1 0.694
1if8 SBSCarbonic anhydrase 2 4.2.1.1 0.694
1i9q IOFCarbonic anhydrase 2 4.2.1.1 0.693
3kig DA4Carbonic anhydrase 2 4.2.1.1 0.693
3m67 E36Carbonic anhydrase 2 4.2.1.1 0.693
1bn3 AL6Carbonic anhydrase 2 4.2.1.1 0.692
3mhc ARZCarbonic anhydrase 2 4.2.1.1 0.692
3s8x E59Carbonic anhydrase 2 4.2.1.1 0.691
1oq5 CELCarbonic anhydrase 2 4.2.1.1 0.687
3b4f TUOCarbonic anhydrase 2 4.2.1.1 0.685
3mzc S6ICarbonic anhydrase 2 4.2.1.1 0.685
1bnq AL4Carbonic anhydrase 2 4.2.1.1 0.683
3mhi J90Carbonic anhydrase 2 4.2.1.1 0.681
1xpz 4TZCarbonic anhydrase 2 4.2.1.1 0.680
2nmx M25Carbonic anhydrase 1 4.2.1.1 0.679
1dmy AZMCarbonic anhydrase 5A, mitochondrial 4.2.1.1 0.678
1i90 INMCarbonic anhydrase 2 4.2.1.1 0.678
1i9n IOACarbonic anhydrase 2 4.2.1.1 0.678
1g45 FSBCarbonic anhydrase 2 4.2.1.1 0.676
3f4x KLTCarbonic anhydrase 2 4.2.1.1 0.676
3ni5 C1HCarbonic anhydrase 2 4.2.1.1 0.676
4ht2 V50Carbonic anhydrase 12 4.2.1.1 0.672
3eft 3BSCarbonic anhydrase 2 4.2.1.1 0.671
1i8z INLCarbonic anhydrase 2 4.2.1.1 0.669
1i9p IOECarbonic anhydrase 2 4.2.1.1 0.669
3dd8 2C7Carbonic anhydrase 2 4.2.1.1 0.668
3oys OYSCarbonic anhydrase 2 4.2.1.1 0.668
5fl4 9FKCarbonic anhydrase 9 4.2.1.1 0.668
1bnn AL1Carbonic anhydrase 2 4.2.1.1 0.667
3daz MZMCarbonic anhydrase 2 4.2.1.1 0.667
3sax E50Carbonic anhydrase 2 4.2.1.1 0.667
1okn STBCarbonic anhydrase 2 4.2.1.1 0.666
2x7t WZBCarbonic anhydrase 2 4.2.1.1 0.664
4hu1 V13Carbonic anhydrase 13 4.2.1.1 0.661
1g52 F2BCarbonic anhydrase 2 4.2.1.1 0.660
1okm SABCarbonic anhydrase 2 4.2.1.1 0.660
1xq0 4TRCarbonic anhydrase 2 4.2.1.1 0.660
3m2y BE0Carbonic anhydrase 2 4.2.1.1 0.656
1if5 FBTCarbonic anhydrase 2 4.2.1.1 0.655
4kp5 E1FCarbonic anhydrase 12 4.2.1.1 0.655
3myq E27Carbonic anhydrase 2 4.2.1.1 0.654
3ffp LC1Carbonic anhydrase 2 4.2.1.1 0.653
1cny EG3Carbonic anhydrase 2 4.2.1.1 0.652
3m96 E38Carbonic anhydrase 2 4.2.1.1 0.651
2wd2 MS5Carbonic anhydrase 2 4.2.1.1 0.650
4kp8 E1GCarbonic anhydrase 12 4.2.1.1 0.650