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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4jsj QJ7 Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4jsj QJ7Nitric oxide synthase, brain 1.14.13.39 0.964
3jx0 JI4Nitric oxide synthase, brain 1.14.13.39 0.806
3nlk JSSNitric oxide synthase, brain 1.14.13.39 0.803
4k5d 1Q6Nitric oxide synthase, brain 1.14.13.39 0.792
3nln JRSNitric oxide synthase, brain 1.14.13.39 0.788
4jsg Q10Nitric oxide synthase, brain 1.14.13.39 0.785
4k5g Q13Nitric oxide synthase, brain 1.14.13.39 0.776
4lux QJ8Nitric oxide synthase, brain 1.14.13.39 0.775
3nlv 3XANitric oxide synthase, brain 1.14.13.39 0.767
3nlp JSSNitric oxide synthase, brain 1.14.13.39 0.766
3jws JI4Nitric oxide synthase, brain 1.14.13.39 0.762
3jx2 JI4Nitric oxide synthase, brain 1.14.13.39 0.760
4k5e 1Q7Nitric oxide synthase, brain 1.14.13.39 0.759
3nlr JRSNitric oxide synthase, brain 1.14.13.39 0.756
3tyl AXWNitric oxide synthase, brain 1.14.13.39 0.750
3n5z XFMNitric oxide synthase, brain 1.14.13.39 0.748
3b3p JI7Nitric oxide synthase, brain 1.14.13.39 0.747
3jx5 J14Nitric oxide synthase, brain 1.14.13.39 0.747
3ufo HW4Nitric oxide synthase, brain 1.14.13.39 0.747
3ufr H5WNitric oxide synthase, brain 1.14.13.39 0.747
3nlw 3XFNitric oxide synthase, brain 1.14.13.39 0.744
3tym 08RNitric oxide synthase, brain 1.14.13.39 0.742
3n62 XFJNitric oxide synthase, brain 1.14.13.39 0.741
3ufq HW5Nitric oxide synthase, brain 1.14.13.39 0.741
3n5v XFHNitric oxide synthase, brain 1.14.13.39 0.739
3jx4 J11Nitric oxide synthase, brain 1.14.13.39 0.738
4eux HW1Nitric oxide synthase, brain 1.14.13.39 0.737
4imu 1ETNitric oxide synthase, brain 1.14.13.39 0.736
4jsh Q15Nitric oxide synthase, brain 1.14.13.39 0.735
3b3o JI3Nitric oxide synthase, brain 1.14.13.39 0.731
3e68 AT6Nitric oxide synthase, inducible 1.14.13.39 0.731
3n61 XFJNitric oxide synthase, brain 1.14.13.39 0.731
3ufp H4WNitric oxide synthase, brain 1.14.13.39 0.731
3nnz 59WNitric oxide synthase, brain 1.14.13.39 0.730
4imw 1EVNitric oxide synthase, brain 1.14.13.39 0.729
3jwu J11Nitric oxide synthase, brain 1.14.13.39 0.727
4jsi Q05Nitric oxide synthase, brain 1.14.13.39 0.719
3n63 XFNNitric oxide synthase, brain 1.14.13.39 0.715
4k5f Q14Nitric oxide synthase, brain 1.14.13.39 0.713
4jse QJ2Nitric oxide synthase, brain 1.14.13.39 0.711
4imt 1EWNitric oxide synthase, brain 1.14.13.39 0.706
4jsf QJ4Nitric oxide synthase, brain 1.14.13.39 0.702
3nlo JSRNitric oxide synthase, brain 1.14.13.39 0.701
3ufv HW9Nitric oxide synthase, brain 1.14.13.39 0.700
3n66 XFNNitric oxide synthase, brain 1.14.13.39 0.699
3n60 XFNNitric oxide synthase, brain 1.14.13.39 0.693
4lwb QJ8Nitric oxide synthase oxygenase 1.14.13.165 0.693
1m9j CLWNitric oxide synthase, endothelial 1.14.13.39 0.682
4uga Q05Nitric oxide synthase oxygenase 1.14.13.165 0.668
4ug7 1EVNitric oxide synthase oxygenase 1.14.13.165 0.667
4ug9 1EWNitric oxide synthase oxygenase 1.14.13.165 0.664
3n5w XFJNitric oxide synthase, brain 1.14.13.39 0.654
3n5x XFKNitric oxide synthase, brain 1.14.13.39 0.653