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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4jsf H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.918
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.891
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.891
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.890
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.890
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.889
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.889
3png H4BNitric oxide synthase, brain 1.14.13.39 0.889
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.889
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.889
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.889
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.888
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.888
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.888
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.888
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.887
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.887
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.887
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.887
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.887
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.886
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.886
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.886
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.883
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.882
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.880
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.878
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.875
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.875
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.875
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.874
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.874
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.874
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.874
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.873
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.873
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.873
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.873
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.873
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.873
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.873
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.872
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.872
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.872
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.872
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.872
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.872
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.872
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.872
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.871
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.871
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.870
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.870
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.870
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.870
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.869
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.869
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.868
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.868
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.868
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.868
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.867
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.866
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.866
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.865
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.862
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.861
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.860
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.857
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.857
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.855
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.855
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.854
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.854
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.854
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.853
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.852
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.852
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.852
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.851
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.850
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.848
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.848
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.844
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.843
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.840
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.840
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.840
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.839
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.838
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.837
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.836
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.836
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.830
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.823
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.823
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.822
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.814
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.801
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.795
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.781
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.778
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.767
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.758
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.728
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.697
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.694
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.693
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.689
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.688
3e67 H4BNitric oxide synthase, inducible 1.14.13.39 0.664
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.662
4e5f 0N7Polymerase acidic protein / 0.660
1m8d H4BNitric oxide synthase, inducible 1.14.13.39 0.657