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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4jse QJ2 Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4jse QJ2Nitric oxide synthase, brain 1.14.13.39 0.959
4k5d 1Q6Nitric oxide synthase, brain 1.14.13.39 0.772
4jsg Q10Nitric oxide synthase, brain 1.14.13.39 0.770
4k5e 1Q7Nitric oxide synthase, brain 1.14.13.39 0.762
3ufq HW5Nitric oxide synthase, brain 1.14.13.39 0.758
3ufo HW4Nitric oxide synthase, brain 1.14.13.39 0.756
4imu 1ETNitric oxide synthase, brain 1.14.13.39 0.756
4jsh Q15Nitric oxide synthase, brain 1.14.13.39 0.756
3jws JI4Nitric oxide synthase, brain 1.14.13.39 0.750
3jx0 JI4Nitric oxide synthase, brain 1.14.13.39 0.750
3tyl AXWNitric oxide synthase, brain 1.14.13.39 0.748
3tym 08RNitric oxide synthase, brain 1.14.13.39 0.747
3b3p JI7Nitric oxide synthase, brain 1.14.13.39 0.746
3n61 XFJNitric oxide synthase, brain 1.14.13.39 0.745
4eux HW1Nitric oxide synthase, brain 1.14.13.39 0.744
3nlk JSSNitric oxide synthase, brain 1.14.13.39 0.740
3n63 XFNNitric oxide synthase, brain 1.14.13.39 0.739
4k5g Q13Nitric oxide synthase, brain 1.14.13.39 0.739
3n66 XFNNitric oxide synthase, brain 1.14.13.39 0.738
3n5z XFMNitric oxide synthase, brain 1.14.13.39 0.737
3nlp JSSNitric oxide synthase, brain 1.14.13.39 0.737
3ufr H5WNitric oxide synthase, brain 1.14.13.39 0.736
3b3o JI3Nitric oxide synthase, brain 1.14.13.39 0.734
4jsi Q05Nitric oxide synthase, brain 1.14.13.39 0.733
3n60 XFNNitric oxide synthase, brain 1.14.13.39 0.732
4imw 1EVNitric oxide synthase, brain 1.14.13.39 0.730
3n5x XFKNitric oxide synthase, brain 1.14.13.39 0.725
3n5w XFJNitric oxide synthase, brain 1.14.13.39 0.721
3n65 XFJNitric oxide synthase, brain 1.14.13.39 0.716
3e68 AT6Nitric oxide synthase, inducible 1.14.13.39 0.712
3nlv 3XANitric oxide synthase, brain 1.14.13.39 0.712
4jsj QJ7Nitric oxide synthase, brain 1.14.13.39 0.711
3nlw 3XFNitric oxide synthase, brain 1.14.13.39 0.707
4ug7 1EVNitric oxide synthase oxygenase 1.14.13.165 0.707
3jwu J11Nitric oxide synthase, brain 1.14.13.39 0.705
3jx2 JI4Nitric oxide synthase, brain 1.14.13.39 0.695
3jx5 J14Nitric oxide synthase, brain 1.14.13.39 0.695
4cx4 HW9Nitric oxide synthase, brain 1.14.13.39 0.695
3ufp H4WNitric oxide synthase, brain 1.14.13.39 0.694
3n5y XFLNitric oxide synthase, brain 1.14.13.39 0.693
3ufv HW9Nitric oxide synthase, brain 1.14.13.39 0.692
4imt 1EWNitric oxide synthase, brain 1.14.13.39 0.680
3dqr JI2Nitric oxide synthase, brain 1.14.13.39 0.675
3jx4 J11Nitric oxide synthase, brain 1.14.13.39 0.670
4ug5 XFKNitric oxide synthase oxygenase 1.14.13.165 0.670
4ug9 1EWNitric oxide synthase oxygenase 1.14.13.165 0.670
3n5v XFHNitric oxide synthase, brain 1.14.13.39 0.661
4lwb QJ8Nitric oxide synthase oxygenase 1.14.13.165 0.661
4k5f Q14Nitric oxide synthase, brain 1.14.13.39 0.660
4uga Q05Nitric oxide synthase oxygenase 1.14.13.165 0.660