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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4ix4 ADP Uncharacterized protein

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4ix4 ADPUncharacterized protein / 0.938
4ix6 ADPUncharacterized protein / 0.742
2pvr ANPCasein kinase II subunit alpha 2.7.11.1 0.703
4ix5 ANPUncharacterized protein / 0.694
5cu6 ATPCasein kinase II subunit alpha 2.7.11.1 0.694
4cki ADNProto-oncogene tyrosine-protein kinase receptor Ret 2.7.10.1 0.671
3gu4 ANPDeath-associated protein kinase 1 2.7.11.1 0.664
3uim ANPBRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 2.7.10.1 0.663
3kn5 ANPRibosomal protein S6 kinase alpha-5 2.7.11.1 0.659
3w0r ANPHygromycin-B 4-O-kinase 2.7.1.163 0.652
2xan ANPInositol-pentakisphosphate 2-kinase 2.7.1.158 0.651
3lct ADPALK tyrosine kinase receptor 2.7.10.1 0.651
3ung ADPCRISPR system Cmr subunit Cmr2 / 0.651
4h3q ANPMitogen-activated protein kinase 1 2.7.11.24 0.650