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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4iwz 1GO Carbonic anhydrase 2 4.2.1.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4iwz 1GOCarbonic anhydrase 2 4.2.1.1 0.871
3mhc ARZCarbonic anhydrase 2 4.2.1.1 0.815
1zsb AZMCarbonic anhydrase 2 4.2.1.1 0.809
3dc3 AZMCarbonic anhydrase 2 4.2.1.1 0.805
3v2j AZMCarbonic anhydrase 2 4.2.1.1 0.803
4lu3 AZMCarbonic anhydrase 14 4.2.1.1 0.798
4uov AZMCarbonate dehydratase / 0.798
1rj6 AZMCarbonic anhydrase 14 4.2.1.1 0.772
4xiw AZMCarbonic anhydrase, alpha type / 0.769
3d9z D9ZCarbonic anhydrase 2 4.2.1.1 0.765
4k0z MZMCarbonic anhydrase 2 4.2.1.1 0.763
4bf6 X0QCarbonic anhydrase 2 4.2.1.1 0.758
2h4n AZMCarbonic anhydrase 2 4.2.1.1 0.757
4x5s AZMCarbonic anhydrase (Carbonate dehydratase) / 0.754
1jd0 AZMCarbonic anhydrase 12 4.2.1.1 0.753
3dcc D9ZCarbonic anhydrase 2 4.2.1.1 0.749
3ni5 C1HCarbonic anhydrase 2 4.2.1.1 0.746
4k0t D9ZCarbonic anhydrase 2 4.2.1.1 0.745
3dcw EZLCarbonic anhydrase 2 4.2.1.1 0.743
3dcs MZMCarbonic anhydrase 2 4.2.1.1 0.738
3mdz EZLCarbonic anhydrase 7 4.2.1.1 0.737
3dbu D8WCarbonic anhydrase 2 4.2.1.1 0.735
3kig DA4Carbonic anhydrase 2 4.2.1.1 0.735
3d8w D8WCarbonic anhydrase 2 4.2.1.1 0.726
4k13 ETSCarbonic anhydrase 2 4.2.1.1 0.726
1cil ETSCarbonic anhydrase 2 4.2.1.1 0.724
2weg FBVCarbonic anhydrase 2 4.2.1.1 0.719
3m2n J74Carbonic anhydrase 2 4.2.1.1 0.719
1dmy AZMCarbonic anhydrase 5A, mitochondrial 4.2.1.1 0.716
3ffp LC1Carbonic anhydrase 2 4.2.1.1 0.716
3eft 3BSCarbonic anhydrase 2 4.2.1.1 0.715
1bnm AL8Carbonic anhydrase 2 4.2.1.1 0.714
1bnt AL2Carbonic anhydrase 2 4.2.1.1 0.714
1i91 INQCarbonic anhydrase 2 4.2.1.1 0.714
3mhi J90Carbonic anhydrase 2 4.2.1.1 0.714
3daz MZMCarbonic anhydrase 2 4.2.1.1 0.712
3dd0 EZLCarbonic anhydrase 2 4.2.1.1 0.712
3nb5 R21Carbonic anhydrase 2 4.2.1.1 0.712
3mna DWHCarbonic anhydrase 2 4.2.1.1 0.708
1bn1 AL5Carbonic anhydrase 2 4.2.1.1 0.705
2weo FBWCarbonic anhydrase 2 4.2.1.1 0.705
4dz7 D02Carbonic anhydrase 2 4.2.1.1 0.705
4ito MPXCarbonic anhydrase 2 4.2.1.1 0.704
3mhl J71Carbonic anhydrase 2 4.2.1.1 0.703
4m2v BZ1Carbonic anhydrase 2 4.2.1.1 0.703
1bnu AL3Carbonic anhydrase 2 4.2.1.1 0.702
1bn3 AL6Carbonic anhydrase 2 4.2.1.1 0.699
3mmf D9HCarbonic anhydrase 2 4.2.1.1 0.699
1bn4 AL9Carbonic anhydrase 2 4.2.1.1 0.698
1g52 F2BCarbonic anhydrase 2 4.2.1.1 0.698
1bnn AL1Carbonic anhydrase 2 4.2.1.1 0.697
1okm SABCarbonic anhydrase 2 4.2.1.1 0.697
1if4 FBSCarbonic anhydrase 2 4.2.1.1 0.696
1oq5 CELCarbonic anhydrase 2 4.2.1.1 0.695
2wej FB2Carbonic anhydrase 2 4.2.1.1 0.695
1i8z INLCarbonic anhydrase 2 4.2.1.1 0.694
1okn STBCarbonic anhydrase 2 4.2.1.1 0.694
3oyq OYQCarbonic anhydrase 2 4.2.1.1 0.694
3m40 J45Carbonic anhydrase 2 4.2.1.1 0.693
3s8x E59Carbonic anhydrase 2 4.2.1.1 0.692
4ilx 1EZCarbonic anhydrase 2 4.2.1.1 0.692
1g1d FSBCarbonic anhydrase 2 4.2.1.1 0.689
4kap 1QVCarbonic anhydrase 2 4.2.1.1 0.689
3sbh E65Carbonic anhydrase 2 4.2.1.1 0.688
4kp8 E1GCarbonic anhydrase 12 4.2.1.1 0.687
1i9q IOFCarbonic anhydrase 2 4.2.1.1 0.685
2q1q OSPCarbonic anhydrase 2 4.2.1.1 0.685
4ht2 V50Carbonic anhydrase 12 4.2.1.1 0.684
3rz8 RZ8Carbonic anhydrase 2 4.2.1.1 0.683
1i90 INMCarbonic anhydrase 2 4.2.1.1 0.680
3k2f NKXCarbonic anhydrase 2 4.2.1.1 0.679
1if7 SBRCarbonic anhydrase 2 4.2.1.1 0.678
1yda AZMCarbonic anhydrase 2 4.2.1.1 0.678
2nmx M25Carbonic anhydrase 1 4.2.1.1 0.678
1a42 BZUCarbonic anhydrase 2 4.2.1.1 0.676
1kwq SG1Carbonic anhydrase 2 4.2.1.1 0.676
3sbi E90Carbonic anhydrase 2 4.2.1.1 0.676
1g4o BSBCarbonic anhydrase 2 4.2.1.1 0.675
1if5 FBTCarbonic anhydrase 2 4.2.1.1 0.675
1if6 FBUCarbonic anhydrase 2 4.2.1.1 0.675
1bnv AL7Carbonic anhydrase 2 4.2.1.1 0.672
3po6 DT9Carbonic anhydrase 2 4.2.1.1 0.672
3qyk IE2Carbonic anhydrase 2 4.2.1.1 0.672
3znc BZ1Carbonic anhydrase 4 4.2.1.1 0.671
1i9n IOACarbonic anhydrase 2 4.2.1.1 0.669
3ml2 SU0Carbonic anhydrase 2 4.2.1.1 0.669
2wd2 MS5Carbonic anhydrase 2 4.2.1.1 0.667
3f7b AG5Carbonic anhydrase 4 4.2.1.1 0.667
1if8 SBSCarbonic anhydrase 2 4.2.1.1 0.666
3f4x KLTCarbonic anhydrase 2 4.2.1.1 0.666
3m2y BE0Carbonic anhydrase 2 4.2.1.1 0.666
1g45 FSBCarbonic anhydrase 2 4.2.1.1 0.664
1i9p IOECarbonic anhydrase 2 4.2.1.1 0.663
1bnq AL4Carbonic anhydrase 2 4.2.1.1 0.660
3m67 E36Carbonic anhydrase 2 4.2.1.1 0.660
3m98 E02Carbonic anhydrase 2 4.2.1.1 0.659
2weh FB1Carbonic anhydrase 2 4.2.1.1 0.657
3s9t E49Carbonic anhydrase 2 4.2.1.1 0.657
2h15 B19Carbonic anhydrase 2 4.2.1.1 0.655
3lxe TORCarbonic anhydrase 1 4.2.1.1 0.655
4itp 1GDCarbonic anhydrase 2 4.2.1.1 0.652
3igp DT7Carbonic anhydrase 2 4.2.1.1 0.651
3n2p AYXCarbonic anhydrase 2 4.2.1.1 0.650