Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4itp 1GD Carbonic anhydrase 2 4.2.1.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4itp 1GDCarbonic anhydrase 2 4.2.1.1 0.880
2wej FB2Carbonic anhydrase 2 4.2.1.1 0.784
3s8x E59Carbonic anhydrase 2 4.2.1.1 0.773
4ito MPXCarbonic anhydrase 2 4.2.1.1 0.768
3sbh E65Carbonic anhydrase 2 4.2.1.1 0.766
3nb5 R21Carbonic anhydrase 2 4.2.1.1 0.765
4ilx 1EZCarbonic anhydrase 2 4.2.1.1 0.760
1cnx EG2Carbonic anhydrase 2 4.2.1.1 0.756
3mhi J90Carbonic anhydrase 2 4.2.1.1 0.756
1okm SABCarbonic anhydrase 2 4.2.1.1 0.755
2weo FBWCarbonic anhydrase 2 4.2.1.1 0.755
3qyk IE2Carbonic anhydrase 2 4.2.1.1 0.755
1g1d FSBCarbonic anhydrase 2 4.2.1.1 0.754
3oys OYSCarbonic anhydrase 2 4.2.1.1 0.752
3mho J43Carbonic anhydrase 2 4.2.1.1 0.750
3m2n J74Carbonic anhydrase 2 4.2.1.1 0.745
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
3oy0 OY0Carbonic anhydrase 2 4.2.1.1 0.744
1if6 FBUCarbonic anhydrase 2 4.2.1.1 0.741
3mhl J71Carbonic anhydrase 2 4.2.1.1 0.737
1if8 SBSCarbonic anhydrase 2 4.2.1.1 0.736
4kp8 E1GCarbonic anhydrase 12 4.2.1.1 0.736
1cnw EG1Carbonic anhydrase 2 4.2.1.1 0.734
1cny EG3Carbonic anhydrase 2 4.2.1.1 0.732
1g54 FFBCarbonic anhydrase 2 4.2.1.1 0.731
4uov AZMCarbonate dehydratase / 0.730
3m67 E36Carbonic anhydrase 2 4.2.1.1 0.728
3ffp LC1Carbonic anhydrase 2 4.2.1.1 0.727
3sbi E90Carbonic anhydrase 2 4.2.1.1 0.726
3rz8 RZ8Carbonic anhydrase 2 4.2.1.1 0.725
1g52 F2BCarbonic anhydrase 2 4.2.1.1 0.723
3m2y BE0Carbonic anhydrase 2 4.2.1.1 0.721
3oyq OYQCarbonic anhydrase 2 4.2.1.1 0.721
3v2j AZMCarbonic anhydrase 2 4.2.1.1 0.721
1okn STBCarbonic anhydrase 2 4.2.1.1 0.720
3b4f TUOCarbonic anhydrase 2 4.2.1.1 0.720
3m96 E38Carbonic anhydrase 2 4.2.1.1 0.720
1bnw TPDCarbonic anhydrase 2 4.2.1.1 0.719
2weg FBVCarbonic anhydrase 2 4.2.1.1 0.714
4x5s AZMCarbonic anhydrase (Carbonate dehydratase) / 0.714
4xiw AZMCarbonic anhydrase, alpha type / 0.714
2q1q OSPCarbonic anhydrase 2 4.2.1.1 0.711
3fw3 ETSCarbonic anhydrase 4 4.2.1.1 0.711
4bf6 X0QCarbonic anhydrase 2 4.2.1.1 0.711
1zsb AZMCarbonic anhydrase 2 4.2.1.1 0.709
1bnu AL3Carbonic anhydrase 2 4.2.1.1 0.708
3d9z D9ZCarbonic anhydrase 2 4.2.1.1 0.706
4bf1 9FKCarbonic anhydrase 2 4.2.1.1 0.706
3dc3 AZMCarbonic anhydrase 2 4.2.1.1 0.704
4m2r BZ1Carbonic anhydrase 2 4.2.1.1 0.702
3mna DWHCarbonic anhydrase 2 4.2.1.1 0.700
2weh FB1Carbonic anhydrase 2 4.2.1.1 0.699
1i8z INLCarbonic anhydrase 2 4.2.1.1 0.698
1rj6 AZMCarbonic anhydrase 14 4.2.1.1 0.698
1if4 FBSCarbonic anhydrase 2 4.2.1.1 0.697
4k13 ETSCarbonic anhydrase 2 4.2.1.1 0.696
3l14 I7BCarbonic anhydrase 2 4.2.1.1 0.695
3m40 J45Carbonic anhydrase 2 4.2.1.1 0.694
1bnq AL4Carbonic anhydrase 2 4.2.1.1 0.692
1bnv AL7Carbonic anhydrase 2 4.2.1.1 0.692
1oq5 CELCarbonic anhydrase 2 4.2.1.1 0.692
2h4n AZMCarbonic anhydrase 2 4.2.1.1 0.692
1bnn AL1Carbonic anhydrase 2 4.2.1.1 0.690
3dcs MZMCarbonic anhydrase 2 4.2.1.1 0.690
2eu3 FF3Carbonic anhydrase 2 4.2.1.1 0.689
2nmx M25Carbonic anhydrase 1 4.2.1.1 0.689
1bnt AL2Carbonic anhydrase 2 4.2.1.1 0.686
3dbu D8WCarbonic anhydrase 2 4.2.1.1 0.686
1g4o BSBCarbonic anhydrase 2 4.2.1.1 0.685
3mmf D9HCarbonic anhydrase 2 4.2.1.1 0.685
1bn3 AL6Carbonic anhydrase 2 4.2.1.1 0.683
4k0z MZMCarbonic anhydrase 2 4.2.1.1 0.683
1bn1 AL5Carbonic anhydrase 2 4.2.1.1 0.682
1bn4 AL9Carbonic anhydrase 2 4.2.1.1 0.682
1xq0 4TRCarbonic anhydrase 2 4.2.1.1 0.681
1jd0 AZMCarbonic anhydrase 12 4.2.1.1 0.680
1i91 INQCarbonic anhydrase 2 4.2.1.1 0.679
1kwr SG2Carbonic anhydrase 2 4.2.1.1 0.679
3dd0 EZLCarbonic anhydrase 2 4.2.1.1 0.679
2nn7 M29Carbonic anhydrase 1 4.2.1.1 0.678
3po6 DT9Carbonic anhydrase 2 4.2.1.1 0.678
3k2f NKXCarbonic anhydrase 2 4.2.1.1 0.675
1okl MNSCarbonic anhydrase 2 4.2.1.1 0.673
1g45 FSBCarbonic anhydrase 2 4.2.1.1 0.669
3ml2 SU0Carbonic anhydrase 2 4.2.1.1 0.668
3daz MZMCarbonic anhydrase 2 4.2.1.1 0.666
1i9p IOECarbonic anhydrase 2 4.2.1.1 0.662
1if5 FBTCarbonic anhydrase 2 4.2.1.1 0.662
1xpz 4TZCarbonic anhydrase 2 4.2.1.1 0.662
3sax E50Carbonic anhydrase 2 4.2.1.1 0.662
3dcw EZLCarbonic anhydrase 2 4.2.1.1 0.658
3lxe TORCarbonic anhydrase 1 4.2.1.1 0.657
4knj E1FCarbonic anhydrase 2 4.2.1.1 0.656
3igp DT7Carbonic anhydrase 2 4.2.1.1 0.655
3da2 4MDCarbonic anhydrase 13 4.2.1.1 0.653
5fl4 9FKCarbonic anhydrase 9 4.2.1.1 0.653
4dz7 D02Carbonic anhydrase 2 4.2.1.1 0.652
4iwz 1GOCarbonic anhydrase 2 4.2.1.1 0.652
2x7t WZBCarbonic anhydrase 2 4.2.1.1 0.651